Co-expression analysis

Gene ID	GmaAffx.74681.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g26140: unknown protein (HF=4e-1)
Module size	6 genes
NF	0.08
%ile	24.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.1	0.92	GmaAffx.74681.1.S1_at	BU550733	-	-	4e-1	At1g26140	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	76.3	0.93	GmaAffx.74681.3.S1_at	BQ610580	-	-	2e-1	At1g26140	unknown protein	O.I.	H.G.	S.X.	Please select
0.11	14.2	0.94	GmaAffx.87757.1.S1_at	BI425898	MYB transcription factor MYB139	-	2e-2	At3g46130	MYB111 (MYB DOMAIN PROTEIN 111)	O.I.	H.G.	S.X.	Please select
0.08	11.0	0.95	GmaAffx.343.1.S1_at	CA938606	-	-	1e-4	At5g24920	AtGDU5 (Arabidopsis thaliana GLUTAMINE DUMPER 5)	O.I.	H.G.	S.X.	Please select
0.06	9.0	0.94	GmaAffx.23289.1.S1_at	CD392087	-	-	4e-1	At5g56280	CSN6A	O.I.	H.G.	S.X.	Please select
0.03	5.8	0.94	GmaAffx.14030.1.S1_at	BE021503	-	-	3e-2	At1g23120	major latex protein-related / MLP-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the barley gene, HVSMEk0004G16r2_at, orthologous to the query gene, GmaAffx.74681.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	HVSMEk0004G16r2_at	At1g26140	-	-	9e-1	At5g47500	pectinesterase family protein	O.I.	H.G.	S.X.	Please select
0.44	58.9	Contig4745_s_at	At1g26140	-	-	2e+0	At5g37520	unknown protein	O.I.	H.G.	S.X.	Please select
0.08	6.5	HVSMEg0017C12r2_at	At1g26140	-	-	1e+0	At3g17300	-	O.I.	H.G.	S.X.	Please select
0.07	5.8	HA10K08u_x_at	At1g26140	-	-	4e+0	At1g15830	unknown protein	O.I.	H.G.	S.X.	Please select
0.06	4.8	Contig19947_at	At1g26140	-	-	2e-1	At2g40510	40S ribosomal protein S26 (RPS26A)	O.I.	H.G.	S.X.	Please select
0.03	2.6	Contig1348_at	At1g26140	-	-	7e-31	At2g44120	60S ribosomal protein L7 (RPL7C)	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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