Co-expression analysis

Gene ID	GmaAffx.74120.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g61810: BGLU45 (BETA-GLUCOSIDASE 45) (HF=2e-11)
Module size	16 genes
NF	0.24
%ile	49.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.65	83.8	0.96	GmaAffx.74120.1.S1_at	BI945865	-	-	2e-11	At1g61810	BGLU45 (BETA-GLUCOSIDASE 45)	O.I.	H.G.	S.X.	Please select
0.61	81.8	0.97	GmaAffx.64203.1.S1_at	BI942376	-	-	3e-92	At5g09590	MTHSC70-2 (MITOCHONDRIAL HSP70 2)	O.I.	H.G.	S.X.	Please select
0.52	73.1	0.97	GmaAffx.68810.2.S1_at	BQ611057	-	-	2e-45	At4g02930	elongation factor Tu, putative / EF-Tu, putative	O.I.	H.G.	S.X.	Please select
0.39	54.5	0.97	Gma.3183.3.S1_at	BU964617	-	-	3e-16	At3g20050	ATTCP-1	O.I.	H.G.	S.X.	Please select
0.34	47.2	0.97	GmaAffx.90554.1.S1_s_at	CF806279	-	-	3e-57	At4g31120	SKB1 (SHK1 BINDING PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.32	43.7	0.97	GmaAffx.53249.1.S1_at	AW756517	-	-	8e-35	At3g11830	chaperonin, putative	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.97	Gma.2229.2.S1_at	BM886154	-	-	1e-9	At4g21150	HAP6 (HAPLESS 6)	O.I.	H.G.	S.X.	Please select
0.24	30.9	0.98	GmaAffx.89146.1.S1_s_at	CK605578	-	-	3e-56	At4g31700	RPS6 (RIBOSOMAL PROTEIN S6)	O.I.	H.G.	S.X.	Please select
0.22	28.1	0.98	Gma.10357.2.S1_at	CA783137	-	-	4e-34	At3g03960	chaperonin, putative	O.I.	H.G.	S.X.	Please select
0.21	26.6	0.97	GmaAffx.83845.1.S1_at	CA802902	-	-	3e-16	At4g28510	ATPHB1 (PROHIBITIN 1)	O.I.	H.G.	S.X.	Please select
0.20	25.1	0.98	GmaAffx.68649.1.S1_at	BG238929	-	-	1e-32	At5g26360	chaperonin, putative	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.97	Gma.15507.2.S1_at	BU926772	-	-	7e-12	At2g15790	SQN (SQUINT)	O.I.	H.G.	S.X.	Please select
0.17	21.2	0.97	Gma.9140.2.S1_at	BI944491	-	-	6e-33	At1g45000	26S proteasome regulatory complex subunit p42D, putative	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.98	GmaAffx.89937.1.S1_s_at	CF805652	40S ribosomal S4 protein	-	4e-108	At5g07090	40S ribosomal protein S4 (RPS4B)	O.I.	H.G.	S.X.	Please select
0.14	17.5	0.98	GmaAffx.93118.1.S1_s_at	CF808079	acidic ribosomal protein P0	-	2e-55	At2g40010	60S acidic ribosomal protein P0 (RPP0A)	O.I.	H.G.	S.X.	Please select
0.09	12.0	0.97	GmaAffx.92905.1.S1_s_at	CF808630	-	-	1e-36	At5g50370	adenylate kinase, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.3	97.5	GSM258499	Soybean shoot apical meristem, 4 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
4.1	97.3	GSM258496	Vegetative soybean shoot apical meristem	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.8	97.0	GSM267287	Axillary meristem from 10-day-old soybean seedlings	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
3.6	96.7	GSM309530	storage protein suppression expt, RNAi biol rep2, tech rep1	GSE12314	Storage Protein Suppression in Transgenic Soybean Cotyledons
3.5	96.6	GSM309557	storage protein suppression expt, RNAi biol rep1, tech rep2	GSE12314	Storage Protein Suppression in Transgenic Soybean Cotyledons
3.3	96.2	GSM244898	38_CON.M1W4.CEL, Experimental replicate 4	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance
3.2	96.0	GSM294048	97_2249.2F.R268L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM293566	79_2005.2A.R146L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM309529	storage protein suppression expt, RNAi biol rep1, tech rep1	GSE12314	Storage Protein Suppression in Transgenic Soybean Cotyledons
3.1	95.8	GSM258501	Soybean shoot apical meristem, 1 short-day treatment replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.1	95.8	GSM293747	7_2141.2C.R116L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage