Co-expression analysis

Gene ID GmaAffx.73695.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g24650: ABI3 (ABA INSENSITIVE 3) (HF=6e-9)
Module size 6 genes
NF 0.77
%ile 97.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.99GmaAffx.73695.1.S1_atAW471773--6e-9At3g24650ABI3 (ABA INSENSITIVE 3)O.I.H.G.S.X.
0.9198.60.99Gma.1880.2.S1_atAW704809--3e+0At5g25890IAA28 (INDOLE-3-ACETIC ACID INDUCIBLE 28)O.I.H.G.S.X.
0.8392.50.98GmaAffx.67969.1.S1_atAW395744--8e-2At4g10020AtHSD5 (hydroxysteroid dehydrogenase 5)O.I.H.G.S.X.
0.7790.30.98GmaAffx.57612.1.S1_atAW568460--1e+0At3g43682unknown proteinO.I.H.G.S.X.
0.5778.80.99GmaAffx.84879.1.S1_atAI735921--6e-15At1g17810BETA-TIP (BETA-TONOPLAST INTRINSIC PROTEIN)O.I.H.G.S.X.
0.4463.30.98Gma.16820.1.S1_s_atX05652.1glycinin A5A4B3 /// A5A4B3 subunits precursor (aa -23 to 539) /// glycinin-5e-3At5g19260unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.899.7GSM309343transgenic RNAiOleosin, biol rep 1, tech rep 1GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
17.399.7GSM309344transgenic RNAiOleosin, biol rep 1, tech rep 2GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
16.499.6GSM309531storage protein suppression expt, RNAi biol rep2, tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
15.899.6GSM309341Wild type 1GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
15.299.6GSM309529storage protein suppression expt, RNAi biol rep1, tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
15.099.6GSM309342Wild type 2GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
14.799.6GSM309530storage protein suppression expt, RNAi biol rep2, tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
14.699.6GSM309528storage protein suppression expt, control tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
14.699.6GSM309527storage protein suppression expt, control tech rep1GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
14.399.6GSM309557storage protein suppression expt, RNAi biol rep1, tech rep2GSE12314Storage Protein Suppression in Transgenic Soybean CotyledonsLink to GEO
14.099.6GSM309345transgenic RNAiOleosin, biol rep 2, tech rep 1GSE12300Suppression of oleosin in soybean cotyledonLink to GEO
13.999.6GSM309346transgenic RNAiOleosin, biol rep 2, tech rep 2GSE12300Suppression of oleosin in soybean cotyledonLink to GEO

Inter-species module comparison

A co-expression module including the wheat gene, Ta.20361.1.A1_at, orthologous to the query gene, GmaAffx.73695.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7991.3Ta.20361.1.A1_atAt3g24650--7e-1At1g12070Rho GDP-dissociation inhibitor family proteinO.I.H.G.S.X.
0.6383.1TaAffx.124487.1.A1_atAt3g24650--3e-1At5g26790unknown proteinO.I.H.G.S.X.
0.5779.2Ta.10451.2.A1_x_atAt3g24650--2e+0At5g23070thymidine kinase, putativeO.I.H.G.S.X.
0.5678.6Ta.14129.1.S1_atAt3g24650--9e-2At2g32190unknown proteinO.I.H.G.S.X.
0.5678.6Ta.11707.1.A1_x_atAt3g24650--3e+0At3g01328-O.I.H.G.S.X.
0.5273.7Ta.13875.1.S1_atAt3g24650--2e+0At2g16700ADF5 (ACTIN DEPOLYMERIZING FACTOR 5)O.I.H.G.S.X.
0.5173.0Ta.22085.1.S1_atAt3g24650--7e-1At5g46295unknown proteinO.I.H.G.S.X.
0.4767.9Ta.28617.1.S1_atAt3g24650--7e-7At4g15470-O.I.H.G.S.X.
0.4666.8TaAffx.82723.1.A1_atAt3g24650--2e+0At3g29080unknown proteinO.I.H.G.S.X.
0.4666.8Ta.10451.1.A1_atAt3g24650--2e+0At5g23070thymidine kinase, putativeO.I.H.G.S.X.
0.4464.5Ta.5456.1.A1_atAt3g24650WRKY19-b transcription factor-4e+0At4g02730transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.4464.5Ta.6955.1.S1_atAt3g24650--6e-1At2g34000zinc finger protein-relatedO.I.H.G.S.X.
0.4362.2Ta.15943.1.S1_atAt3g24650--3e+0At4g32915-O.I.H.G.S.X.
0.4159.6TaAffx.37633.1.S1_atAt3g24650--2e-2At2g39110protein kinase, putativeO.I.H.G.S.X.
0.4159.6Ta.20562.1.S1_atAt3g24650--6e+0At5g4004060S acidic ribosomal protein P2 (RPP2E)O.I.H.G.S.X.
0.3753.0Ta.8579.1.A1_atAt3g24650--4e-4At2g45040matrix metalloproteinaseO.I.H.G.S.X.
0.3549.8TaAffx.12293.1.A1_s_atAt3g24650--4e+0At2g29400TOPP1 (TYPE ONE PROTEIN PHOSPHATASE 1)O.I.H.G.S.X.
0.3040.9Ta.22743.1.S1_x_atAt3g24650--7e+0At4g12090cornichon family proteinO.I.H.G.S.X.
0.3040.9TaAffx.84007.1.S1_atAt3g24650--1e+1Atcg00560-O.I.H.G.S.X.
0.3040.9Ta.4736.1.A1_atAt3g24650--6e+0At1g54230DNA bindingO.I.H.G.S.X.
0.2839.2TaAffx.16090.1.S1_atAt3g24650--8e-1At2g3760060S ribosomal protein L36 (RPL36A)O.I.H.G.S.X.
0.2633.6Ta.4947.1.S1_atAt3g24650--1e-9At5g47910RBOHD (RESPIRATORY BURST OXIDASE HOMOLOGUE D)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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