Co-expression analysis

Gene ID GmaAffx.73080.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g21620: glycine-rich protein (HF=2e-1)
Module size 7 genes
NF 0.71
%ile 95.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7589.50.97GmaAffx.73080.1.S1_atBI427357--2e-1At4g21620glycine-rich proteinO.I.H.G.S.X.
0.8693.00.98Gma.13878.1.S1_atCD408791--5e+0At5g01070zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.8693.00.98GmaAffx.36562.2.S1_atBM731207--5e-15At1g14970unknown proteinO.I.H.G.S.X.
0.6786.10.98GmaAffx.82262.1.S1_atBI786890--3e-28At3g51770ETO1 (ETHYLENE OVERPRODUCER 1)O.I.H.G.S.X.
0.5374.20.97GmaAffx.51022.1.S1_atBM519886--9e-1At3g25920RPL15O.I.H.G.S.X.
0.5071.70.98GmaAffx.23963.1.S1_atBQ080815--3e+0At3g42310unknown proteinO.I.H.G.S.X.
0.5071.70.98GmaAffx.39172.1.S1_atBM094230--2e-5At1g12340-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
38.499.9GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
27.199.8GSM308559Mature Soybean (Glycine max) pollen grains Replicate 2GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
26.599.8GSM308560Mature Soybean (Glycine max) pollen grains Replicate 3GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1620986_at, orthologous to the query gene, GmaAffx.73080.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6787.91620986_atAt4g21620--2e-2At2g31957LCR75 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 75)O.I.H.G.S.X.
0.5072.71612848_x_atAt4g21620--2e-19At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)O.I.H.G.S.X.
0.4464.11619608_atAt4g21620--2e-19At5g38410ribulose bisphosphate carboxylase small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B)O.I.H.G.S.X.
0.2937.71608175_atAt4g21620hypothetical protein LOC100265591-4e+0At1g78260RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.2937.71610245_atAt4g21620hypothetical protein LOC100252066-1e-20At2g34430LHB1B1O.I.H.G.S.X.
0.2734.01622344_atAt4g21620hypothetical protein LOC100241684-1e+0At2g03620magnesium transporter CorA-like family protein (MRS2-5)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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