Co-expression analysis

Gene ID	GmaAffx.72479.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g36680: - (HF=3e+0)
Module size	8 genes
NF	0.06
%ile	20.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.38	53.3	0.90	GmaAffx.72479.1.S1_at	BG043825	-	-	3e+0	At2g36680	-	O.I.	H.G.	S.X.	Please select
0.23	29.9	0.94	Gma.7772.1.A1_at	AW349035	-	-	5e+0	Atmg00480	-	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.94	GmaAffx.42516.1.A1_at	BU546094	-	-	2e+0	At3g13500	unknown protein	O.I.	H.G.	S.X.	Please select
0.12	15.1	0.94	GmaAffx.16450.1.S1_at	BM524376	-	-	4e-6	At5g07070	CIPK2 (CBL-INTERACTING PROTEIN KINASE 2)	O.I.	H.G.	S.X.	Please select
0.10	13.0	0.93	GmaAffx.35639.1.A1_at	AW706745	-	-	7e-1	At5g57550	XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3)	O.I.	H.G.	S.X.	Please select
0.08	11.0	0.94	Gma.5870.1.S1_at	BQ610025	-	-	3e+0	At5g43910	pfkB-type carbohydrate kinase family protein	O.I.	H.G.	S.X.	Please select
0.06	9.0	0.94	Gma.15725.1.S1_at	BQ627887	-	-	1e+0	At4g28775	unknown protein	O.I.	H.G.	S.X.	Please select
0.02	4.5	0.90	GmaAffx.18376.1.A1_at	BI321742	-	-	8e-5	At2g02760	ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.1	97.3	GSM294668	3_3218.2M.V7M1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM293105	20_C054.1O.R9O3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM292589	19_C160.1I.V7I3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM292653	7_C156.1I.V7I2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM294114	6_3114.2G.SLG1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM294145	10_3144.2H.V7H3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM292596	26_C146.1I.V7I1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM292979	56_C228.1M.V7M2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM294006	59_3094.2F.V7F1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM292373	47_C104.1F.R9F3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM293464	51_C098.1R.V7R2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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