Co-expression analysis

Gene ID	GmaAffx.71919.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g16090: zinc finger protein-related (HF=6e-14)
Module size	9 genes
NF	0.47
%ile	78.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	82.9	0.98	GmaAffx.71919.1.S1_at	AW756020	-	-	6e-14	At2g16090	zinc finger protein-related	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.98	GmaAffx.68678.1.S1_at	AW307477	-	-	4e-65	At5g35200	epsin N-terminal homology (ENTH) domain-containing protein	O.I.	H.G.	S.X.	Please select
0.56	78.2	0.98	GmaAffx.43283.1.S1_at	AI441881	-	-	3e-84	At2g01690	binding	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.99	GmaAffx.40696.1.S1_at	BM523605	-	-	4e-4	At4g23850	long-chain-fatty-acid--CoA ligase / long-chain acyl-CoA synthetase	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.98	GmaAffx.10804.1.S1_s_at	BF424657	-	-	3e+0	At5g41600	BTI3 (VIRB2-INTERACTING PROTEIN 3)	O.I.	H.G.	S.X.	Please select
0.43	60.6	0.99	GmaAffx.38941.1.S1_at	BM891619	-	-	8e-1	At1g02330	-	O.I.	H.G.	S.X.	Please select
0.32	43.7	0.98	GmaAffx.56265.1.S1_at	BU760907	-	-	1e-7	At5g19400	SMG7	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.99	GmaAffx.34837.1.S1_s_at	AW597752	-	-	1e-4	At4g24740	AFC2 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 2)	O.I.	H.G.	S.X.	Please select
0.24	30.9	0.98	Gma.6034.2.S1_at	BG047127	-	-	2e-63	At3g19420	ATPEN2 (ARABIDOPSIS THALIANA PTEN 2)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage