Co-expression analysis

Gene ID	GmaAffx.71735.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g45240: MAP1A (METHIONINE AMINOPEPTIDASE 1A) (HF=4e-7)
Module size	38 genes
NF	0.19
%ile	42.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.97	99.8	0.97	GmaAffx.71735.1.S1_at	BI973751	-	-	4e-7	At2g45240	MAP1A (METHIONINE AMINOPEPTIDASE 1A)	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.98	GmaAffx.49577.1.S1_at	BU549109	-	-	4e-20	At1g56590	clathrin adaptor complexes medium subunit family protein	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.97	GmaAffx.18005.1.S1_at	BU765846	-	-	2e-13	At4g27630	GTG2 (GPCR-TYPE G PROTEIN 2)	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.97	GmaAffx.71299.1.S1_at	AW569361	-	-	2e-17	At4g34910	DEAD/DEAH box helicase, putative (RH16)	O.I.	H.G.	S.X.	Please select
0.27	35.7	0.98	GmaAffx.74113.1.S1_at	BQ452560	-	-	2e-4	At2g02860	SUT2 (SUCROSE TRANSPORTER 2)	O.I.	H.G.	S.X.	Please select
0.26	33.9	0.97	GmaAffx.56943.1.S1_at	AW185138	-	-	1e+0	At3g56910	PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5)	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.97	GmaAffx.45437.1.S1_at	AI960629	biotin synthase	-	7e-21	At2g43360	BIO2 (BIOTIN AUXOTROPH 2)	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.97	GmaAffx.54917.1.S1_at	AW666047	-	-	5e+0	At5g43440	2-oxoglutarate-dependent dioxygenase, putative	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.98	GmaAffx.89191.1.A1_x_at	CK606438	-	-	1e-20	At3g08520	60S ribosomal protein L41 (RPL41D)	O.I.	H.G.	S.X.	Please select
0.23	29.9	0.97	Gma.10160.1.S1_at	AW309425	-	-	2e-2	At3g48209	-	O.I.	H.G.	S.X.	Please select
0.21	26.6	0.98	Gma.6234.1.S1_at	BQ612367	-	-	3e-31	At3g21865	PEX22 (peroxin 22)	O.I.	H.G.	S.X.	Please select
0.21	26.6	0.98	Gma.4270.1.S1_s_at	CF920385	-	-	2e-19	At3g46010	ADF1 (ACTIN DEPOLYMERIZING FACTOR 1)	O.I.	H.G.	S.X.	Please select
0.20	25.1	0.98	GmaAffx.71580.1.S1_at	AW832468	-	-	5e-77	At2g16920	UBC23 (UBIQUITIN-CONJUGATING ENZYME 23)	O.I.	H.G.	S.X.	Please select
0.20	25.1	0.98	GmaAffx.92831.1.S1_s_at	CF808556	-	-	1e+0	At5g43460	lesion inducing protein-related	O.I.	H.G.	S.X.	Please select
0.20	25.1	0.98	Gma.6495.1.S1_at	BQ612701	-	-	5e-51	At3g25800	PP2AA2 (PROTEIN PHOSPHATASE 2A SUBUNIT A2)	O.I.	H.G.	S.X.	Please select
0.19	23.7	0.97	GmaAffx.29585.1.A1_at	CD397532	-	-	3e+0	At2g31730	ethylene-responsive protein, putative	O.I.	H.G.	S.X.	Please select
0.19	23.7	0.98	GmaAffx.36014.1.S1_at	BU550374	-	-	1e+0	At1g24440	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.19	23.7	0.98	Gma.4335.1.S1_at	BU548713	-	-	8e-3	At2g17190	ubiquitin family protein	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.98	GmaAffx.46711.1.S1_at	BI497564	-	-	4e+0	At4g25560	AtMYB18 (myb domain protein 18)	O.I.	H.G.	S.X.	Please select
0.17	21.2	0.98	GmaAffx.92496.1.S1_s_at	CF808221	-	-	1e-75	At1g78870	UBC35 (UBIQUITIN-CONJUGATING ENZYME 35)	O.I.	H.G.	S.X.	Please select
0.17	21.2	0.99	Gma.3839.1.S1_at	CD391787	-	-	2e-69	At1g60780	HAP13 (HAPLESS 13)	O.I.	H.G.	S.X.	Please select
0.16	19.7	0.98	Gma.414.1.S1_x_at	BE658080	-	-	6e-28	At1g69620	RPL34 (RIBOSOMAL PROTEIN L34)	O.I.	H.G.	S.X.	Please select
0.16	19.7	0.98	GmaAffx.22346.2.S1_at	BM177133	-	-	6e-9	At1g71080	unknown protein	O.I.	H.G.	S.X.	Please select
0.16	19.7	0.98	Gma.9587.1.A1_at	BU547729	-	-	6e+0	At5g47060	senescence-associated protein-related	O.I.	H.G.	S.X.	Please select
0.16	19.7	0.98	GmaAffx.26697.1.S1_at	BE821770	-	-	1e+0	At3g27809	unknown protein	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.98	GmaAffx.7564.2.S1_at	BG509629	-	-	2e-126	At5g64070	PI-4KBETA1 (PHOSPHATIDYLINOSITOL 4-OH KINASE BETA1)	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.98	GmaAffx.76735.1.S1_at	BG405106	-	-	8e-4	At5g44570	unknown protein	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.98	Gma.4208.2.S1_at	CD401340	-	-	2e-34	At1g22780	PFL (POINTED FIRST LEAVES)	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.98	Gma.17700.2.S1_at	AW100928	-	-	2e-19	At2g20760	protein binding / structural molecule	O.I.	H.G.	S.X.	Please select
0.14	17.5	0.98	Gma.10051.2.S1_at	AW508986	-	-	2e-9	At4g11790	Ran-binding protein 1 domain-containing protein / RanBP1 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.14	17.5	0.98	Gma.5527.2.S1_at	BM107788	-	-	3e-16	At5g62600	transportin-SR-related	O.I.	H.G.	S.X.	Please select
0.14	17.5	0.98	Gma.17110.1.S1_at	BM188179	-	-	2e-12	At2g19430	transducin family protein / WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
0.14	17.5	0.98	GmaAffx.40735.1.S1_at	BG315862	MYB transcription factor MYB130	-	4e-7	At3g49850	TRB3 (TELOMERE REPEAT BINDING FACTOR 3)	O.I.	H.G.	S.X.	Please select
0.12	15.1	0.98	GmaAffx.51048.1.S1_s_at	BM521698	-	-	6e-5	At1g29150	ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)	O.I.	H.G.	S.X.	Please select
0.12	15.1	0.98	GmaAffx.3541.2.S1_at	BM567757	-	-	8e-1	At2g37990	ribosome biogenesis regulatory protein (RRS1) family protein	O.I.	H.G.	S.X.	Please select
0.12	15.1	0.98	Gma.1916.1.S1_at	AW185983	-	-	1e-35	At3g47810	MAG1 (MAIGO 1)	O.I.	H.G.	S.X.	Please select
0.11	14.2	0.98	Gma.5581.1.S1_at	CD392224	-	-	8e-53	At3g27430	PBB1	O.I.	H.G.	S.X.	Please select
0.08	11.0	0.98	GmaAffx.77327.1.S1_at	AI900268	-	-	2e-31	At5g01160	e-cadherin binding protein-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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