Co-expression analysis

Gene ID	GmaAffx.71462.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g43230: unknown protein (HF=5e-6)
Module size	6 genes
NF	0.20
%ile	43.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	71.7	0.97	GmaAffx.71462.1.S1_at	BM308753	-	-	5e-6	At5g43230	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.98	GmaAffx.4245.5.S1_s_at	BI787772	-	-	3e+0	At1g29962	AGL64 (AGAMOUS-LIKE 64)	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.98	GmaAffx.45359.2.S1_at	BQ453165	-	-	1e-60	At4g28540	CKL6 (CASEIN KINASE I-LIKE 6)	O.I.	H.G.	S.X.	Please select
0.22	28.1	0.97	Gma.4761.1.S1_a_at	CD413738	-	-	6e-6	At5g27620	CYCH	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.98	GmaAffx.71580.1.S1_at	AW832468	-	-	5e-77	At2g16920	UBC23 (UBIQUITIN-CONJUGATING ENZYME 23)	O.I.	H.G.	S.X.	Please select
0.10	13.0	0.97	Gma.7017.2.S1_s_at	BM269658	-	-	3e+0	At4g22570	APT3 (ADENINE PHOSPHORIBOSYL TRANSFERASE 3)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the maize gene, ZmAffx.789.1.A1_at, orthologous to the query gene, GmaAffx.71462.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	65.7	ZmAffx.789.1.A1_at	At5g43230	-	-	3e+0	At4g05010	F-box family protein	O.I.	H.G.	S.X.	Please select
0.82	94.6	Zm.17685.1.A1_at	At5g43230	-	-	6e-1	At1g55010	PDF1.5 (plant defensin 1.5)	O.I.	H.G.	S.X.	Please select
0.82	94.6	Zm.12134.2.S1_at	At5g43230	hypothetical protein LOC100193898	-	1e+0	At4g08691	unknown protein	O.I.	H.G.	S.X.	Please select
0.80	94.0	Zm.17350.1.A1_at	At5g43230	-	-	2e+1	Atcg00300	-	O.I.	H.G.	S.X.	Please select
0.80	94.0	Zm.509.1.S1_at	At5g43230	calcium pump1	-	3e-11	At1g07810	ECA1 (ER-TYPE CA2+-ATPASE 1)	O.I.	H.G.	S.X.	Please select
0.76	91.1	Zm.16365.1.S1_at	At5g43230	hypothetical protein LOC100278838	-	5e+0	At3g44440	unknown protein	O.I.	H.G.	S.X.	Please select
0.72	88.6	Zm.1737.2.S1_at	At5g43230	-	-	8e-1	At1g15140	oxidoreductase NAD-binding domain-containing protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	Zm.16142.1.S1_at	At5g43230	hypothetical protein LOC100194402	-	9e-1	At5g51210	OLEO3 (OLEOSIN3)	O.I.	H.G.	S.X.	Please select
0.63	81.1	ZmAffx.985.1.S1_at	At5g43230	-	-	1e+1	At4g36900	RAP2.10 (related to AP2 10)	O.I.	H.G.	S.X.	Please select
0.40	48.5	ZmAffx.744.1.A1_s_at	At5g43230	global transcription factor group E	-	1e-1	At1g48300	unknown protein	O.I.	H.G.	S.X.	Please select
0.34	37.2	Zm.1604.1.S1_at	At5g43230	-	-	4e+0	At5g05650	-	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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