Co-expression analysis

Gene ID	GmaAffx.71462.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g43230: unknown protein (HF=5e-6)
Module size	6 genes
NF	0.20
%ile	43.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	71.7	0.97	GmaAffx.71462.1.S1_at	BM308753	-	-	5e-6	At5g43230	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.98	GmaAffx.4245.5.S1_s_at	BI787772	-	-	3e+0	At1g29962	AGL64 (AGAMOUS-LIKE 64)	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.98	GmaAffx.45359.2.S1_at	BQ453165	-	-	1e-60	At4g28540	CKL6 (CASEIN KINASE I-LIKE 6)	O.I.	H.G.	S.X.	Please select
0.22	28.1	0.97	Gma.4761.1.S1_a_at	CD413738	-	-	6e-6	At5g27620	CYCH	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.98	GmaAffx.71580.1.S1_at	AW832468	-	-	5e-77	At2g16920	UBC23 (UBIQUITIN-CONJUGATING ENZYME 23)	O.I.	H.G.	S.X.	Please select
0.10	13.0	0.97	Gma.7017.2.S1_s_at	BM269658	-	-	3e+0	At4g22570	APT3 (ADENINE PHOSPHORIBOSYL TRANSFERASE 3)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1606524_at, orthologous to the query gene, GmaAffx.71462.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	72.7	1606524_at	At5g43230	hypothetical protein LOC100266440	-	2e-19	At3g01810	-	O.I.	H.G.	S.X.	Please select
0.67	87.9	1607622_at	At5g43230	hypothetical protein LOC100265082	-	8e-17	At2g17370	HMG2 (3-HYDROXY-3-METHYLGLUTARYL-COA REDUCTASE 2)	O.I.	H.G.	S.X.	Please select
0.50	72.7	1622787_at	At5g43230	hypothetical protein LOC100244878	-	4e-19	At5g62500	ATEB1B (END BINDING PROTEIN 1B)	O.I.	H.G.	S.X.	Please select
0.50	72.7	1616050_at	At5g43230	hypothetical protein LOC100244878	-	9e+0	At5g06280	unknown protein	O.I.	H.G.	S.X.	Please select
0.46	66.5	1620603_at	At5g43230	hypothetical protein LOC100256346	-	2e-43	At3g55760	unknown protein	O.I.	H.G.	S.X.	Please select
0.13	13.3	1610669_at	At5g43230	hypothetical protein LOC100259403	-	6e-2	At1g69825	-	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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