Co-expression analysis

Gene ID	GmaAffx.71421.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g14210: AGL44 (AGAMOUS-LIKE 44) (HF=4e-21)
Module size	10 genes
NF	0.51
%ile	82.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.58	78.8	0.78	GmaAffx.71421.1.S1_at	AW706936	-	-	4e-21	At2g14210	AGL44 (AGAMOUS-LIKE 44)	O.I.	H.G.	S.X.	Please select
0.56	78.2	0.92	Gma.6645.1.S1_at	BQ629174	-	-	1e-1	At1g59865	unknown protein	O.I.	H.G.	S.X.	Please select
0.56	78.2	0.92	GmaAffx.15816.1.A1_at	CD409822	-	-	4e+0	At3g13882	structural constituent of ribosome	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.92	GmaAffx.58795.1.S1_at	BG238021	-	-	6e-9	At4g33790	CER4 (ECERIFERUM 4)	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.92	Gma.5273.1.S1_s_at	AI965477	-	-	3e+0	At5g49600	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.93	GmaAffx.87086.1.S1_at	BM091829	-	-	2e-1	At1g02065	SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8)	O.I.	H.G.	S.X.	Please select
0.48	67.7	0.90	Gma.6156.1.S1_at	BQ611827	WRKY64 protein	-	2e-9	At5g41570	WRKY24	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.84	GmaAffx.16632.1.S1_at	AW598371	-	-	1e-1	At1g21340	Dof-type zinc finger domain-containing protein	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.93	Gma.9783.1.S1_at	CA935893	-	-	3e-6	At2g23540	GDSL-motif lipase/hydrolase family protein	O.I.	H.G.	S.X.	Please select
0.39	54.5	0.89	GmaAffx.85946.1.S1_at	BU084846	-	-	2e-1	At4g33610	glycine-rich protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.6	97.7	GSM292628	56_1348.1I.R218P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.3	97.5	GSM294049	98_2281.2F.R224L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM293565	78_2006.2A.R146P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM293867	1_2238.2E.R002P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.0	97.2	GSM292758	21_1412.1K.R255P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM292633	60_1358.1I.R224P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM292535	49_1301.1H.R190L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM294038	88_2282.2F.R224P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM293567	7_2012.2A.R282P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM293731	65_2116.2C.R115P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM292506	22_1304.1H.R191P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM293354	41_1563.1Q.R151L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM292298	44_1182.1E.R111P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM292450	50_1278.1G.R176P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM292309	57_C086.1E.SLE3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM292536	4_1320.1H.R201P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM293817	59_2149.2D.R295L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM292920	92_1474.1L.R287P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM293956	13_2286.2F.R031P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM292898	72_1476.1L.R288P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM292586	16_1336.1I.R211P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM293310	91_1180.1P.R110P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM292583	13_1360.1I.R225P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM292709	56_1396.1J.R246P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM292834	14_1484.1L.R292P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM293879	30_2202.2E.R190P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM293353	40_1564.1Q.R151P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM294032	82_2281.2F.R224U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM293547	61_2043.2A.R007L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM292851	2_1450.1L.R275P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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