Co-expression analysis

Gene ID	GmaAffx.71343.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g38880: unknown protein (HF=1e-16)
Module size	31 genes
NF	0.24
%ile	48.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.92	98.9	0.96	GmaAffx.71343.1.S1_at	BE555273	-	-	1e-16	At5g38880	unknown protein	O.I.	H.G.	S.X.	Please select
0.39	54.5	0.97	Gma.5747.2.S1_at	BI498317	-	-	2e-12	At1g48410	AGO1 (ARGONAUTE 1)	O.I.	H.G.	S.X.	Please select
0.35	48.6	0.97	Gma.11099.1.S1_at	BE473645	-	-	2e-5	At3g56120	Met-10+ like family protein	O.I.	H.G.	S.X.	Please select
0.34	47.2	0.97	GmaAffx.50885.1.A1_at	BU547477	-	-	3e-1	At1g48630	RACK1B_AT (RECEPTOR FOR ACTIVATED C KINASE 1 B)	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.97	GmaAffx.76633.1.S1_at	AW396184	-	-	1e-7	At4g30820	cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related	O.I.	H.G.	S.X.	Please select
0.30	40.4	0.97	Gma.13221.1.A1_at	BE819862	-	-	6e+0	At5g52140	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.97	GmaAffx.86607.1.S1_at	BE824381	-	-	1e-54	At2g17510	EMB2763 (EMBRYO DEFECTIVE 2763)	O.I.	H.G.	S.X.	Please select
0.28	39.0	0.98	Gma.12088.1.S1_s_at	BG508802	-	-	2e-21	At3g18210	oxidoreductase, 2OG-Fe(II) oxygenase family protein	O.I.	H.G.	S.X.	Please select
0.26	33.9	0.98	GmaAffx.59321.1.S1_at	BI974317	-	-	1e+0	At2g30990	unknown protein	O.I.	H.G.	S.X.	Please select
0.26	33.9	0.97	Gma.1373.2.A1_s_at	BI968510	-	-	6e-25	At2g26770	plectin-related	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.97	GmaAffx.64006.1.S1_at	AI988156	-	-	1e+0	At4g28530	anac074 (Arabidopsis NAC domain containing protein 74)	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.98	GmaAffx.63439.1.S1_at	BQ628576	-	-	3e-34	At1g01510	AN (ANGUSTIFOLIA)	O.I.	H.G.	S.X.	Please select
0.24	30.9	0.98	Gma.7153.1.S1_at	BE823360	-	-	3e-52	At2g41530	SFGH (S-FORMYLGLUTATHIONE HYDROLASE)	O.I.	H.G.	S.X.	Please select
0.23	29.9	0.98	GmaAffx.85539.1.S1_at	AW348505	-	-	1e+0	At5g10410	epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related	O.I.	H.G.	S.X.	Please select
0.22	28.1	0.97	Gma.6142.1.S1_at	CA819653	-	-	2e-13	At1g78150	unknown protein	O.I.	H.G.	S.X.	Please select
0.22	28.1	0.97	GmaAffx.35530.1.S1_at	BE800387	-	-	6e-1	At5g42530	unknown protein	O.I.	H.G.	S.X.	Please select
0.22	28.1	0.98	Gma.7443.1.S1_a_at	AW100678	-	-	9e-3	At4g30890	UBP24 (UBIQUITIN-SPECIFIC PROTEASE 24)	O.I.	H.G.	S.X.	Please select
0.21	26.6	0.97	Gma.541.1.S1_at	AW156279	-	-	5e-70	At5g57110	ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8)	O.I.	H.G.	S.X.	Please select
0.21	26.6	0.97	GmaAffx.83370.2.S1_at	BE058746	-	-	3e-2	At5g25510	serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative	O.I.	H.G.	S.X.	Please select
0.20	25.1	0.98	Gma.4932.1.S1_at	BI970670	NDX1 homeobox protein	-	2e-5	At4g03090	sequence-specific DNA binding / transcription factor	O.I.	H.G.	S.X.	Please select
0.20	25.1	0.98	GmaAffx.29052.1.S1_at	BU577178	-	-	1e+0	At4g14600	-	O.I.	H.G.	S.X.	Please select
0.20	25.1	0.98	Gma.10528.1.S1_at	BM270365	-	-	6e-25	At1g71350	eukaryotic translation initiation factor SUI1 family protein	O.I.	H.G.	S.X.	Please select
0.17	21.2	0.98	Gma.1925.1.S1_at	AW310700	-	-	5e-33	At1g69010	BIM2 (BES1-interacting Myc-like protein 2)	O.I.	H.G.	S.X.	Please select
0.17	21.2	0.97	GmaAffx.14073.1.S1_at	BI967773	-	-	1e+0	At3g16310	mitotic phosphoprotein N' end (MPPN) family protein	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.98	Gma.6112.1.S1_at	AY143592.1	urease accessory protein UreF	-	9e-9	At1g21840	UREF (urease accessory protein F)	O.I.	H.G.	S.X.	Please select
0.14	17.5	0.97	GmaAffx.46796.1.S1_at	BU546851	-	-	6e-54	At3g12680	HUA1 (ENHANCER OF AG-4 1)	O.I.	H.G.	S.X.	Please select
0.14	17.5	0.98	Gma.17523.1.S1_s_at	CD399565	-	-	8e-24	At5g51940	NRPB6A	O.I.	H.G.	S.X.	Please select
0.14	17.5	0.98	Gma.8015.1.S1_at	CD402874	-	-	1e-4	At3g19840	FF domain-containing protein / WW domain-containing protein	O.I.	H.G.	S.X.	Please select
0.14	17.5	0.97	GmaAffx.52867.1.A1_at	AW310514	-	-	3e-15	At2g16860	GCIP-interacting family protein	O.I.	H.G.	S.X.	Please select
0.13	16.3	0.98	GmaAffx.61197.1.S1_at	BE211614	-	-	1e-20	At4g27760	FEY (FOREVER YOUNG)	O.I.	H.G.	S.X.	Please select
0.12	15.1	0.98	Gma.8062.1.A1_a_at	BI971176	-	-	1e-7	At2g21630	transport protein, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.4	96.4	GSM258502	Vegetative shoot apical meristem, replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.3	96.2	GSM258503	Soybean shoot apical meristem, 2 short-day replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.3	96.2	GSM258504	Soybean shoot apical meristem, 4 short-day replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.1	95.8	GSM258497	Soybean Shoot Apical Meristem, 1 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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