Co-expression analysis

Gene ID	GmaAffx.70783.1.S1_at
Gene name	sodium/proton antiporter
Homology with Arabidopsis	Similar to At5g27150: NHX1 (NA+/H+ EXCHANGER) (HF=2e-17)
Module size	11 genes
NF	0.63
%ile	91.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.64	83.4	0.98	GmaAffx.70783.1.S1_at	BQ612167	sodium/proton antiporter	-	2e-17	At5g27150	NHX1 (NA+/H+ EXCHANGER)	O.I.	H.G.	S.X.	Please select
0.80	91.5	0.99	GmaAffx.68425.1.S1_at	BI425905	-	-	1e-35	At3g57650	LPAT2	O.I.	H.G.	S.X.	Please select
0.70	87.1	0.99	GmaAffx.58610.1.S1_at	BF066199	-	-	1e-2	At3g49430	SRp34a (Ser/Arg-rich protein 34a)	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.99	Gma.7528.2.S1_at	BM891312	-	-	3e-49	At4g16143	IMPA-2 (IMPORTIN ALPHA ISOFORM 2)	O.I.	H.G.	S.X.	Please select
0.61	81.8	0.99	GmaAffx.55210.1.S1_at	BE804778	-	-	5e-1	At1g08650	PPCK1 (PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE)	O.I.	H.G.	S.X.	Please select
0.58	78.8	0.99	GmaAffx.29121.1.S1_at	BU762958	-	-	1e+0	At4g17310	unknown protein	O.I.	H.G.	S.X.	Please select
0.56	78.2	0.99	GmaAffx.56889.1.S1_s_at	AW781023	-	-	3e-7	At3g59380	FTA (FARNESYLTRANSFERASE A)	O.I.	H.G.	S.X.	Please select
0.56	78.2	0.99	GmaAffx.43069.1.S1_at	AI494747	-	-	4e-7	At1g14570	UBX domain-containing protein	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.99	GmaAffx.92182.1.S1_s_at	CF807907	-	-	9e-1	At1g69800	CBS domain-containing protein	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.99	Gma.5720.2.S1_a_at	BG652626	-	-	2e-5	At1g51200	zinc finger (AN1-like) family protein	O.I.	H.G.	S.X.	Please select
0.48	67.7	0.99	GmaAffx.90621.1.S1_s_at	CF806346	-	-	4e-50	At2g21270	ubiquitin fusion degradation UFD1 family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the wheat gene, Ta.2760.1.S1_at, orthologous to the query gene, GmaAffx.70783.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.61	82.0	Ta.2760.1.S1_at	At5g27150	Na+/H+ antiporter	-	2e-11	At5g27150	NHX1 (NA+/H+ EXCHANGER)	O.I.	H.G.	S.X.	Please select
0.73	89.1	TaAffx.102859.1.S1_at	At5g27150	-	-	3e-1	At5g40250	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.53	74.9	Ta.27928.1.S1_at	At5g27150	-	-	2e+1	At3g52510	-	O.I.	H.G.	S.X.	Please select
0.44	64.5	Ta.7012.2.S1_at	At5g27150	-	-	3e-15	At1g79870	oxidoreductase family protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	Ta.7012.2.S1_x_at	At5g27150	-	-	3e-15	At1g79870	oxidoreductase family protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	Ta.28828.1.S1_s_at	At5g27150	-	-	1e-5	At3g06350	MEE32 (MATERNAL EFFECT EMBRYO ARREST 32)	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage