Co-expression analysis

Gene ID	GmaAffx.69670.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g22670: AtHip1 (Arabidopsis thaliana Hsp70-interacting protein 1) (HF=7e-5)
Module size	7 genes
NF	0.51
%ile	82.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	74.2	0.98	GmaAffx.69670.1.S1_at	BQ742118	-	-	7e-5	At4g22670	AtHip1 (Arabidopsis thaliana Hsp70-interacting protein 1)	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.98	GmaAffx.67700.1.S1_at	CB063625	-	-	9e-1	At5g13620	unknown protein	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.98	GmaAffx.91473.1.S1_at	CF807198	-	-	3e-22	At4g28860	ckl4 (Casein Kinase I-like 4)	O.I.	H.G.	S.X.	Please select
0.48	67.7	0.98	GmaAffx.90745.1.S1_s_at	CF806470	-	-	4e+0	At5g42235	Expressed protein	O.I.	H.G.	S.X.	Please select
0.48	67.7	0.98	GmaAffx.83672.1.S1_at	BU926827	-	-	2e-51	At2g26000	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.98	GmaAffx.4382.3.S1_at	CA784372	-	-	9e-18	At1g18470	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.98	GmaAffx.40419.1.S1_at	BF325410	-	-	1e-11	At3g03570	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.3	96.2	GSM293911	5_2236.2E.R249P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM293718	53_2144.2C.R109P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM293060	61_C034.1N.R9N3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM292825	82_C184.1K.R9K1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

A co-expression module including the wheat gene, Ta.16045.1.S1_at, orthologous to the query gene, GmaAffx.69670.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	Ta.16045.1.S1_at	At4g22670	-	-	6e+0	At4g23860	PHD finger protein-related	O.I.	H.G.	S.X.	Please select
0.32	44.4	AFFX-Tae-r2-Bs-thr-5_s_at	At4g22670	-	-				O.I.	H.G.	S.X.	Please select
0.32	44.4	AFFX-Tae-r2-Ec-bioB-3_at	At4g22670	-	-				O.I.	H.G.	S.X.	Please select
0.29	39.2	Ta.27101.10.S1_x_at	At4g22670	-	-	1e-26	At5g10980	histone H3	O.I.	H.G.	S.X.	Please select
0.21	25.5	Ta.2502.1.S1_a_at	At4g22670	HSP80-2	-	0	At5g56000	heat shock protein 81-4 (HSP81-4)	O.I.	H.G.	S.X.	Please select
0.17	19.8	Ta.357.1.S1_at	At4g22670	-	-	8e-20	At5g22060	ATJ2	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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