Co-expression analysis

Gene ID GmaAffx.69311.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g59720: HSP18.2 (heat shock protein 18.2) (HF=4e-16)
Module size 6 genes
NF 0.02
%ile 10.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6786.10.71GmaAffx.69311.1.S1_atAW620208--4e-16At5g59720HSP18.2 (heat shock protein 18.2)O.I.H.G.S.X.
0.5071.70.87GmaAffx.93268.1.S1_s_atCF807875--2e-9At2g2950017.6 kDa class I small heat shock protein (HSP17.6B-CI)O.I.H.G.S.X.
0.4463.30.78GmaAffx.93268.1.S1_atCF807875--2e-9At2g2950017.6 kDa class I small heat shock protein (HSP17.6B-CI)O.I.H.G.S.X.
0.4057.10.67Gma.10763.1.S1_atAW567704--2e-6At5g12020HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)O.I.H.G.S.X.
0.013.40.68Gma.6811.2.S1_a_atAW100836--6e-1At4g25515SLK3 (SEUSS-LIKE 3)O.I.H.G.S.X.
0.013.40.68GmaAffx.54278.1.S1_atBG154611--2e+1At3g27999enzyme inhibitor/ pectinesteraseO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.899.1GSM147945Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
8.699.1GSM201123Laser capture microdissected (LCM) seed coat hilum at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
8.399.1GSM147954Laser capture microdissected (LCM) outer integument at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
7.899.0GSM201122Laser capture microdissected (LCM) seed coat hilum at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
7.598.9GSM147951Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
6.998.8GSM147942Laser capture microdissected (LCM) endothelium at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
6.898.7GSM147953Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
6.898.7GSM147947Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
6.898.7GSM147956Laser capture microdissected (LCM) outer integument at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
6.698.7GSM147952Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
6.698.7GSM201120Laser capture microdissected (LCM) seed coat hourglass at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
6.698.7GSM147936Laser capture microdissected (LCM) suspensor at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
6.598.7GSM182044Laser capture microdissected (LCM) inner integument at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
6.398.6GSM147946Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
6.398.6GSM147955Laser capture microdissected (LCM) outer integument at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
6.398.6GSM147948Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
6.198.5GSM147950Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
6.198.5GSM182039Laser capture microdissected (LCM) epidermis at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
6.098.5GSM191086Soybean_Cotyledon_HI2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
6.098.5GSM182045Laser capture microdissected (LCM) outer integument at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
6.098.5GSM191085Soybean_Cotyledon_HI1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
5.998.5GSM147944Laser capture microdissected (LCM) endothelium at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.998.5GSM147943Laser capture microdissected (LCM) endothelium at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.898.4GSM182041Laser capture microdissected (LCM) hilum at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
5.898.4GSM182046Laser capture microdissected (LCM) outer integument at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
5.898.4GSM182043Laser capture microdissected (LCM) inner integument at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
5.798.4GSM147949Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.798.4GSM182040Laser capture microdissected (LCM) epidermis at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
5.798.4GSM201124Laser capture microdissected (LCM) seed coat palisade at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
5.698.3GSM191084Soybean_Cotyledon_EPD2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage