Co-expression analysis

Gene ID	GmaAffx.67823.2.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g23240: DNAJ heat shock N-terminal domain-containing protein (HF=1e-3)
Module size	6 genes
NF	0.81
%ile	98.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	79.5	0.87	GmaAffx.67823.2.S1_at	BG043066	-	-	1e-3	At5g23240	DNAJ heat shock N-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.83	92.5	0.90	Gma.17656.1.S1_at	BE807213	-	-	1e+0	At3g58780	SHP1 (SHATTERPROOF 1)	O.I.	H.G.	S.X.	Please select
0.83	92.5	0.91	Gma.1688.1.S1_at	BU762030	-	-	2e+0	At4g36990	HSF4 (HEAT SHOCK FACTOR 4)	O.I.	H.G.	S.X.	Please select
0.83	92.5	0.91	GmaAffx.86375.1.S1_at	BQ628641	-	-	2e+0	At2g43795	unknown protein	O.I.	H.G.	S.X.	Please select
0.77	90.3	0.90	GmaAffx.80747.2.S1_at	BE209739	-	-	8e-3	At2g43018	CPuORF17 (Conserved peptide upstream open reading frame 17)	O.I.	H.G.	S.X.	Please select
0.67	86.1	0.93	Gma.8757.1.S1_at	BI470070	-	-	2e+0	At3g17930	unknown protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
23.5	99.8	GSM245934	Leaf_Water Control_Rep 2_48 h After Treatment	GSE9730	Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
23.0	99.8	GSM245933	Leaf_Water Control_Rep 1_48 h After Treatment	GSE9730	Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
19.5	99.7	GSM245937	Leaf_LCO treated_Rep 2_48 h After Treatment	GSE9730	Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
19.5	99.7	GSM245936	Leaf_LCO treated_Rep 1_48 h After Treatment	GSE9730	Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
17.7	99.7	GSM245935	Leaf_Water Control_Rep 3_48 h After Treatment	GSE9730	Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
14.9	99.6	GSM245938	Leaf_LCO treated_Rep 3_48 h After Treatment	GSE9730	Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
8.7	99.1	GSM209592	resistant_6hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
7.2	98.9	GSM209584	susceptible_6hours_rep2	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
6.3	98.6	GSM209583	resistant_6hours_rep2	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
5.6	98.3	GSM209574	resistant_6hours_rep1	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
5.2	98.1	GSM209593	susceptible_6hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
4.6	97.7	GSM209575	susceptible_6hours_rep1	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
4.4	97.6	GSM209590	susceptible_48hours_rep2	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
4.1	97.3	GSM238050	Soybean-Mandarin-6-RMA	GSE9374	Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans
3.8	97.0	GSM238051	Soybean-Mandarin-7-RMA	GSE9374	Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeans

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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