Co-expression analysis

Gene ID	GmaAffx.67417.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g14610: CYP72A7 (HF=4e-1)
Module size	42 genes
NF	0.36
%ile	64.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.98	100.0	0.97	GmaAffx.67417.1.S1_at	BE191495	-	-	4e-1	At3g14610	CYP72A7	O.I.	H.G.	S.X.	Please select
0.63	82.9	0.98	GmaAffx.61034.2.S1_at	BU964606	-	-	9e-1	At1g48170	unknown protein	O.I.	H.G.	S.X.	Please select
0.51	72.3	0.98	GmaAffx.69146.1.S1_at	BE020450	-	-	2e-2	At2g26000	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.47	66.6	0.98	Gma.1760.3.S1_at	BM893205	-	-	5e-1	At2g36295	unknown protein	O.I.	H.G.	S.X.	Please select
0.46	65.5	0.98	GmaAffx.77370.1.S1_at	BE210000	-	-	8e-5	At1g05500	NTMC2T2.1	O.I.	H.G.	S.X.	Please select
0.45	63.9	0.98	GmaAffx.51194.1.S1_at	BE347913	-	-	4e-12	At2g47830	cation efflux family protein / metal tolerance protein, putative (MTPc1)	O.I.	H.G.	S.X.	Please select
0.45	63.9	0.98	GmaAffx.90994.1.S1_s_at	CF806719	-	-	7e-12	At4g11410	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	H.G.	S.X.	Please select
0.43	60.6	0.98	GmaAffx.55210.1.S1_at	BE804778	-	-	5e-1	At1g08650	PPCK1 (PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE)	O.I.	H.G.	S.X.	Please select
0.43	60.6	0.98	GmaAffx.60396.1.S1_at	AI900017	-	-	6e-7	At3g52640	nicastrin-related	O.I.	H.G.	S.X.	Please select
0.42	59.3	0.98	Gma.5562.3.S1_at	AW830226	-	-	9e-28	At2g47070	SPL1 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 1)	O.I.	H.G.	S.X.	Please select
0.42	59.3	0.98	GmaAffx.86611.1.S1_at	BI316735	-	-	2e-34	At5g02800	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.41	58.1	0.98	GmaAffx.79142.1.S1_at	BG654123	-	-	6e-6	At4g35140	transducin family protein / WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
0.41	58.1	0.98	GmaAffx.76294.1.S1_at	BM187909	-	-	5e-18	At3g20290	ATEHD1 (EPS15 HOMOLOGY DOMAIN 1)	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.98	GmaAffx.18114.2.S1_at	BU762948	-	-	3e-10	At3g05090	transducin family protein / WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.98	GmaAffx.46100.1.S1_at	BM086686	-	-	8e-9	At3g02680	NBS1 (NIJMEGEN BREAKAGE SYNDROME 1)	O.I.	H.G.	S.X.	Please select
0.39	54.5	0.98	GmaAffx.65978.1.S1_at	AI441698	-	-	3e-7	At2g32400	GLR5 (GLUTAMATE RECEPTOR 5)	O.I.	H.G.	S.X.	Please select
0.39	54.5	0.98	GmaAffx.20219.1.S1_at	CA799858	-	-	9e-1	At1g02960	unknown protein	O.I.	H.G.	S.X.	Please select
0.39	54.5	0.98	GmaAffx.65978.2.S1_at	BE802793	-	-	6e-1	At1g77746	unknown protein	O.I.	H.G.	S.X.	Please select
0.39	54.5	0.98	GmaAffx.56888.1.S1_at	BF069451	-	-	3e-3	At3g16230	RNA binding / catalytic	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.98	GmaAffx.12516.1.S1_at	AW277285	-	-	3e-4	At3g58460	ATRBL15 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 15)	O.I.	H.G.	S.X.	Please select
0.37	51.7	0.98	Gma.13316.2.S1_a_at	CA935957	-	-	3e-1	At3g13340	WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
0.37	51.7	0.98	GmaAffx.70783.1.S1_at	BQ612167	sodium/proton antiporter	-	2e-17	At5g27150	NHX1 (NA+/H+ EXCHANGER)	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.98	GmaAffx.5702.1.S1_at	BQ576576	-	-	2e+0	At5g64720	unknown protein	O.I.	H.G.	S.X.	Please select
0.35	48.6	0.98	Gma.8837.2.S1_at	AI736453	-	-	1e-26	At4g03020	transducin family protein / WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
0.35	48.6	0.98	GmaAffx.84623.1.S1_at	BQ298236	-	-	1e-12	At1g05500	NTMC2T2.1	O.I.	H.G.	S.X.	Please select
0.35	48.6	0.98	GmaAffx.91054.1.S1_s_at	CF806779	-	-	2e-8	At1g04230	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.98	Gma.3600.2.S1_at	BQ253736	-	-	4e-39	At1g43640	AtTLP5 (TUBBY LIKE PROTEIN 5)	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.98	GmaAffx.90063.1.S1_s_at	CF805788	glutathione S-transferase GST 23	-	2e-5	At5g41210	ATGSTT1 (GLUTATHIONE S-TRANSFERASE THETA 1)	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.98	GmaAffx.88360.1.S1_at	BQ473502	-	-	1e-7	At1g71980	protease-associated zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.32	43.7	0.98	GmaAffx.55872.1.S1_at	CA800829	-	-	8e-1	At2g41120	unknown protein	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.98	GmaAffx.38743.1.S1_at	BM177648	-	-	4e-4	At5g23340	-	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.98	GmaAffx.90426.1.S1_s_at	CF806151	urease accessory protein UreF	-	7e-7	At1g21840	UREF (urease accessory protein F)	O.I.	H.G.	S.X.	Please select
0.30	40.4	0.98	GmaAffx.58610.1.S1_at	BF066199	-	-	1e-2	At3g49430	SRp34a (Ser/Arg-rich protein 34a)	O.I.	H.G.	S.X.	Please select
0.30	40.4	0.97	GmaAffx.56406.1.S1_at	BM731162	-	-	8e-1	At2g43018	CPuORF17 (Conserved peptide upstream open reading frame 17)	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.98	GmaAffx.92182.1.S1_s_at	CF807907	-	-	9e-1	At1g69800	CBS domain-containing protein	O.I.	H.G.	S.X.	Please select
0.28	39.0	0.98	GmaAffx.55210.2.S1_at	BE330623	-	-	3e-32	At2g43070	protease-associated (PA) domain-containing protein	O.I.	H.G.	S.X.	Please select
0.27	35.7	0.98	GmaAffx.68490.1.S1_at	BE608583	-	-	6e-2	At1g01550	BPS1 (BYPASS 1)	O.I.	H.G.	S.X.	Please select
0.27	35.7	0.97	Gma.4305.3.S1_a_at	BG044173	-	-	5e-8	At5g57940	ATCNGC5 (CYCLIC NUCLEOTIDE GATED CHANNEL 5)	O.I.	H.G.	S.X.	Please select
0.25	32.6	0.98	GmaAffx.29525.1.S1_at	CA953478	-	-	2e-8	At3g58560	endonuclease/exonuclease/phosphatase family protein	O.I.	H.G.	S.X.	Please select
0.23	29.9	0.98	Gma.5989.2.S1_a_at	BU965260	-	-	2e-23	At2g17390	AKR2B (ANKYRIN REPEAT-CONTAINING 2B)	O.I.	H.G.	S.X.	Please select
0.23	29.9	0.99	GmaAffx.90621.1.S1_s_at	CF806346	-	-	4e-50	At2g21270	ubiquitin fusion degradation UFD1 family protein	O.I.	H.G.	S.X.	Please select
0.18	22.3	0.98	GmaAffx.90987.1.S1_at	CF806712	-	-	1e+0	At5g64750	ABR1 (ABA REPRESSOR1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage