Co-expression analysis

Gene ID GmaAffx.66424.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g50770: calmodulin-related protein, putative (HF=3e-2)
Module size 8 genes
NF 0.46
%ile 76.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6382.90.83GmaAffx.66424.1.S1_atAW306696--3e-2At3g50770calmodulin-related protein, putativeO.I.H.G.S.X.
0.5778.80.83Gma.15431.1.S1_atBG508249--7e-1At1g34490membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-relatedO.I.H.G.S.X.
0.5374.20.81Gma.4525.1.S1_atBI967718--3e-1At1g09560GLP5 (GERMIN-LIKE PROTEIN 5)O.I.H.G.S.X.
0.4766.60.81GmaAffx.11644.1.S1_atAW156827--8e-1At3g1095060S ribosomal protein L37a (RPL37aB)O.I.H.G.S.X.
0.4057.10.87GmaAffx.72230.1.S1_atBF009687--1e-3At3g07990SCPL27 (serine carboxypeptidase-like 27)O.I.H.G.S.X.
0.4057.10.87GmaAffx.50670.1.A1_atBI970234--8e-1At1g18630GR-RBP6 (glycine-rich RNA-binding protein 6)O.I.H.G.S.X.
0.3142.20.89GmaAffx.3364.1.A1_atBE347229--8e-2At4g15100scpl30 (serine carboxypeptidase-like 30)O.I.H.G.S.X.
0.2329.90.85GmaAffx.17452.1.S1_atAW458587--2e-1At3g12370ribosomal protein L10 family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
25.999.8GSM209598resistant_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
16.499.6GSM209599susceptible_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1622746_at, orthologous to the query gene, GmaAffx.66424.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9095.61622746_atAt3g50770--1e+1Atcg00810-O.I.H.G.S.X.
0.5679.41606579_atAt3g50770--1e+0At3g23770glycosyl hydrolase family 17 proteinO.I.H.G.S.X.
0.4767.71622124_atAt3g50770--2e+0At2g22570NIC1 (NICOTINAMIDASE 1)O.I.H.G.S.X.
0.4666.51617509_atAt3g50770--2e+0At5g07475plastocyanin-like domain-containing proteinO.I.H.G.S.X.
0.4260.11606916_atAt3g50770--1e-1At3g10640VPS60.1O.I.H.G.S.X.
0.4057.71615721_atAt3g50770--4e+0At3g23620brix domain-containing proteinO.I.H.G.S.X.
0.4057.71618360_atAt3g50770--5e-13At2g32080PUR ALPHA-1O.I.H.G.S.X.
0.3853.61614246_atAt3g50770--3e-4At1g23480ATCSLA03 (CELLULOSE SYNTHASE-LIKE A3)O.I.H.G.S.X.
0.3751.71619863_atAt3g50770--2e+0At1g19930kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.3751.71609440_atAt3g50770--4e+0At3g57310protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.3751.71610687_atAt3g50770--1e-35At2g37680-O.I.H.G.S.X.
0.3650.71617437_atAt3g50770--4e+0At5g65780ATBCAT-5O.I.H.G.S.X.
0.3650.71614691_atAt3g50770--1e+0At3g54360protein binding / zinc ion bindingO.I.H.G.S.X.
0.3446.81613218_atAt3g50770--3e+0At1g80520-O.I.H.G.S.X.
0.3345.71606737_atAt3g50770--3e+0At2g45860unknown proteinO.I.H.G.S.X.
0.3345.71617312_atAt3g50770--7e-2At4g15970unknown proteinO.I.H.G.S.X.
0.3243.11621173_s_atAt3g50770hypothetical protein LOC100245878-1e+0At2g33870ArRABA1h (Arabidopsis Rab GTPase homolog A1h)O.I.H.G.S.X.
0.3141.31610035_x_atAt3g50770hypothetical protein LOC100248145-4e-22At1g04410malate dehydrogenase, cytosolic, putativeO.I.H.G.S.X.
0.3141.31616093_atAt3g50770similar to pectin methylesterase 1-6e-2At4g33220enzyme inhibitor/ pectinesteraseO.I.H.G.S.X.
0.3141.31617497_atAt3g50770hypothetical protein LOC100248145-4e-22At1g04410malate dehydrogenase, cytosolic, putativeO.I.H.G.S.X.
0.3039.41611243_atAt3g50770--3e-14At5g24650mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family proteinO.I.H.G.S.X.
0.2837.71607190_atAt3g50770--1e+0At2g35480unknown proteinO.I.H.G.S.X.
0.2734.01619350_atAt3g50770--5e+0At5g06430thioredoxin-relatedO.I.H.G.S.X.
0.2632.01619805_atAt3g50770similar to leucine-rich repeat protein-related-4e-9At1g25570leucine-rich repeat protein-relatedO.I.H.G.S.X.
0.2428.71612391_atAt3g50770hypothetical protein LOC100266034-2e-1At4g14815protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.2327.51618610_atAt3g50770--9e-2At3g28223-O.I.H.G.S.X.
0.2225.61612286_atAt3g50770--4e+0At3g55252-O.I.H.G.S.X.
0.2022.41609037_atAt3g50770--4e-3At5g08350GRAM domain-containing protein / ABA-responsive protein-relatedO.I.H.G.S.X.
0.1920.91621847_atAt3g50770hypothetical protein LOC100267426-4e+0At4g17310unknown proteinO.I.H.G.S.X.
0.1515.61607162_s_atAt3g50770--3e+0At2g30570PSBW (PHOTOSYSTEM II REACTION CENTER W)O.I.H.G.S.X.
0.1414.41609085_atAt3g50770--9e-1At5g02790In2-1 protein, putativeO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage