Co-expression analysis

Gene ID GmaAffx.66424.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g50770: calmodulin-related protein, putative (HF=3e-2)
Module size 8 genes
NF 0.46
%ile 76.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6382.90.83GmaAffx.66424.1.S1_atAW306696--3e-2At3g50770calmodulin-related protein, putativeO.I.H.G.S.X.
0.5778.80.83Gma.15431.1.S1_atBG508249--7e-1At1g34490membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-relatedO.I.H.G.S.X.
0.5374.20.81Gma.4525.1.S1_atBI967718--3e-1At1g09560GLP5 (GERMIN-LIKE PROTEIN 5)O.I.H.G.S.X.
0.4766.60.81GmaAffx.11644.1.S1_atAW156827--8e-1At3g1095060S ribosomal protein L37a (RPL37aB)O.I.H.G.S.X.
0.4057.10.87GmaAffx.72230.1.S1_atBF009687--1e-3At3g07990SCPL27 (serine carboxypeptidase-like 27)O.I.H.G.S.X.
0.4057.10.87GmaAffx.50670.1.A1_atBI970234--8e-1At1g18630GR-RBP6 (glycine-rich RNA-binding protein 6)O.I.H.G.S.X.
0.3142.20.89GmaAffx.3364.1.A1_atBE347229--8e-2At4g15100scpl30 (serine carboxypeptidase-like 30)O.I.H.G.S.X.
0.2329.90.85GmaAffx.17452.1.S1_atAW458587--2e-1At3g12370ribosomal protein L10 family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
25.999.8GSM209598resistant_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
16.499.6GSM209599susceptible_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO

Inter-species module comparison

A co-expression module including the wheat gene, TaAffx.52333.1.S1_at, orthologous to the query gene, GmaAffx.66424.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9298.5TaAffx.52333.1.S1_atAt3g50770--1e+0At1g43600NLI interacting factor (NIF) family proteinO.I.H.G.S.X.
0.5173.0TaAffx.90193.1.S1_atAt3g50770--6e-2At4g36050endonuclease/exonuclease/phosphatase family proteinO.I.H.G.S.X.
0.3244.4Ta.7410.3.S1_s_atAt3g50770--7e-2At1g35510unknown proteinO.I.H.G.S.X.
0.3142.7Ta.8158.1.A1_atAt3g50770--4e-1At5g04120phosphoglycerate/bisphosphoglycerate mutase family proteinO.I.H.G.S.X.
0.3142.7TaAffx.5323.1.S1_atAt3g50770--4e-6At4g32600zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3040.9Ta.1685.1.A1_s_atAt3g50770--4e+0At1g13330-O.I.H.G.S.X.
0.3040.9TaAffx.41681.1.S1_atAt3g50770--7e-3At1g29220transcriptional regulator family proteinO.I.H.G.S.X.
0.3040.9Ta.2593.2.S1_x_atAt3g50770--1e-25At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)O.I.H.G.S.X.
0.2939.2Ta.8098.2.S1_atAt3g50770--6e+0At3g14200DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.2839.2TaAffx.128803.1.S1_atAt3g50770--2e+0At5g09750HEC3 (HECATE 3)O.I.H.G.S.X.
0.2839.2Ta.4881.2.A1_a_atAt3g50770--1e+0At5g06450nucleic acid bindingO.I.H.G.S.X.
0.2735.6Ta.6385.1.S1_atAt3g50770--7e-16At4g33200XI-IO.I.H.G.S.X.
0.2735.6Ta.3321.1.A1_atAt3g50770--4e-10At3g24200FAD binding / monooxygenase/ oxidoreductase/ oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygenO.I.H.G.S.X.
0.2735.6Ta.2593.2.S1_atAt3g50770--1e-25At5g62000ARF2 (AUXIN RESPONSE FACTOR 2)O.I.H.G.S.X.
0.2430.3Ta.9887.3.A1_x_atAt3g50770--3e-2At5g5729060S acidic ribosomal protein P3 (RPP3B)O.I.H.G.S.X.
0.2430.3Ta.523.1.S1_atAt3g50770--2e-5At2g30880pleckstrin homology (PH) domain-containing proteinO.I.H.G.S.X.
0.2227.1Ta.25617.1.S1_atAt3g50770--4e-5At3g11220Paxneb protein-relatedO.I.H.G.S.X.
0.2125.5Ta.1855.1.A1_atAt3g50770--5e+0At5g39600unknown proteinO.I.H.G.S.X.
0.2125.5TaAffx.20511.1.S1_atAt3g50770--7e-11At1g03000PEX6 (PEROXIN 6)O.I.H.G.S.X.
0.2125.5Ta.7410.2.S1_atAt3g50770--3e-1At1g04970lipid-binding serum glycoprotein family proteinO.I.H.G.S.X.
0.2125.5TaAffx.118218.1.S1_atAt3g50770--1e+0At5g49310IMPA-5 (IMPORTIN ALPHA ISOFORM 5)O.I.H.G.S.X.
0.2125.5Ta.1307.3.S1_atAt3g50770--5e-11At2g27100SE (SERRATE)O.I.H.G.S.X.
0.2125.5Ta.2818.1.S1_x_atAt3g50770--6e-1At1g53260unknown proteinO.I.H.G.S.X.
0.2024.0Ta.8971.1.S1_atAt3g50770--2e-10At3g12480NF-YC11 (NUCLEAR FACTOR Y, SUBUNIT C11)O.I.H.G.S.X.
0.2024.0TaAffx.113301.1.S1_atAt3g50770--2e-2At4g20290unknown proteinO.I.H.G.S.X.
0.1922.4Ta.5005.1.S1_x_atAt3g50770--9e-1At2g33610ATSWI3B (SWITCH SUBUNIT 3)O.I.H.G.S.X.
0.1719.8Ta.25396.1.S1_atAt3g50770--5e+0At1g29040unknown proteinO.I.H.G.S.X.
0.1719.8Ta.10112.1.S1_atAt3g50770--4e-12At3g20650mRNA capping enzyme family proteinO.I.H.G.S.X.
0.1618.2Ta.9068.1.S1_atAt3g50770--8e-8At4g12610transcription initiation factor IIF alpha subunit (TFIIF-alpha) family proteinO.I.H.G.S.X.
0.1415.8Ta.27085.1.S1_atAt3g50770--3e-9At5g25480DNMT2 (DNA METHYLTRANSFERASE-2)O.I.H.G.S.X.
0.089.4Ta.2643.2.S1_x_atAt3g50770--1e-3At1g71790F-actin capping protein beta subunit family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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