Co-expression analysis

Gene ID GmaAffx.66424.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g50770: calmodulin-related protein, putative (HF=3e-2)
Module size 8 genes
NF 0.46
%ile 76.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6382.90.83GmaAffx.66424.1.S1_atAW306696--3e-2At3g50770calmodulin-related protein, putativeO.I.H.G.S.X.
0.5778.80.83Gma.15431.1.S1_atBG508249--7e-1At1g34490membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-relatedO.I.H.G.S.X.
0.5374.20.81Gma.4525.1.S1_atBI967718--3e-1At1g09560GLP5 (GERMIN-LIKE PROTEIN 5)O.I.H.G.S.X.
0.4766.60.81GmaAffx.11644.1.S1_atAW156827--8e-1At3g1095060S ribosomal protein L37a (RPL37aB)O.I.H.G.S.X.
0.4057.10.87GmaAffx.72230.1.S1_atBF009687--1e-3At3g07990SCPL27 (serine carboxypeptidase-like 27)O.I.H.G.S.X.
0.4057.10.87GmaAffx.50670.1.A1_atBI970234--8e-1At1g18630GR-RBP6 (glycine-rich RNA-binding protein 6)O.I.H.G.S.X.
0.3142.20.89GmaAffx.3364.1.A1_atBE347229--8e-2At4g15100scpl30 (serine carboxypeptidase-like 30)O.I.H.G.S.X.
0.2329.90.85GmaAffx.17452.1.S1_atAW458587--2e-1At3g12370ribosomal protein L10 family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
25.999.8GSM209598resistant_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
16.499.6GSM209599susceptible_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os05g0592300, orthologous to the query gene, GmaAffx.66424.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5676.3Os05g0592300At3g50770-RmlC-like cupin family protein8e-1At5g54550unknown proteinO.I.H.G.S.X.
0.5068.0Os06g0683700At3g50770-Hypothetical protein1e+0At1g75717unknown proteinO.I.H.G.S.X.
0.4660.9Os01g0880800At3g50770-Acyl-[acyl-carrier-protein] desaturase,chloroplast precursor (EC 1.14.19.2) (Stearoyl-ACPdesaturase)1e-5At1g43800acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeO.I.H.G.S.X.
0.4355.4Os01g0865100At3g50770-Uricase (Fragment)4e-5At2g26230uricase / urate oxidase / nodulin 35, putativeO.I.H.G.S.X.
0.4355.4Os02g0649800At3g50770-Cytochrome b5 isoform 12e+0At1g72170unknown proteinO.I.H.G.S.X.
0.3032.7Os08g0345700At3g50770-Pyrophosphate--fructose 6-phosphate1-phosphotransferase alpha subunit (EC 2.7.1.90) (PFP)(6-phosphofructokinase, pyrophosphate-dependent)(Pyrophosphate-dependent 6-phosphofructose-1-kinase)(PPi-PFK)6e-6At1g20950pyrophosphate--fructose-6-phosphate 1-phosphotransferase-related / pyrophosphate-dependent 6-phosphofructose-1-kinase-relatedO.I.H.G.S.X.
0.3032.7Os04g0586100At3g50770-Protein of unknown function DUF581 family protein2e+0At4g17670senescence-associated protein-relatedO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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