Co-expression analysis

Gene ID	GmaAffx.66328.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g16180: TMS membrane family protein / tumour differentially expressed (TDE) family protein (HF=3e-13)
Module size	10 genes
NF	0.53
%ile	83.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	78.8	0.98	GmaAffx.66328.1.S1_at	AW277770	-	-	3e-13	At1g16180	TMS membrane family protein / tumour differentially expressed (TDE) family protein	O.I.	H.G.	S.X.	Please select
0.71	87.8	0.98	Gma.7674.1.A1_at	BQ785403	-	-	3e-36	At2g20130	LCV1 (LIKE COV 1)	O.I.	H.G.	S.X.	Please select
0.60	80.7	0.98	Gma.3535.1.S1_x_at	CD392670	-	-	2e+0	At5g24650	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	O.I.	H.G.	S.X.	Please select
0.59	79.5	0.98	GmaAffx.90586.1.S1_s_at	CF806311	-	-	4e-16	At5g01960	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.52	73.1	0.98	Gma.3535.2.S1_at	BG047223	-	-	2e+0	At2g21320	zinc finger (B-box type) family protein	O.I.	H.G.	S.X.	Please select
0.52	73.1	0.98	Gma.2742.1.A1_at	AW309965	-	-	5e-9	At3g63310	glutamate binding	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.98	Gma.2742.2.S1_at	BI785482	-	-	1e-6	At3g63310	glutamate binding	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.99	GmaAffx.90193.1.S1_s_at	CF805918	-	-	8e-21	At4g31170	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.42	59.3	0.98	Gma.12895.2.S1_at	BM187616	-	-	4e-13	At5g16880	VHS domain-containing protein / GAT domain-containing protein	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.99	Gma.6207.1.S1_s_at	CF922738	-	-	7e-16	At4g19640	ARA7	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage