Co-expression analysis

Gene ID	GmaAffx.661.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g67080: ABA4 (abscisic acid (ABA)-deficient 4) (HF=2e+0)
Module size	6 genes
NF	0.62
%ile	91.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.99	GmaAffx.661.1.S1_at	BI969786	-	-	2e+0	At1g67080	ABA4 (abscisic acid (ABA)-deficient 4)	O.I.	H.G.	S.X.	Please select
0.57	78.8	0.99	Gma.5056.1.S1_at	BI970673	-	-	1e-2	At3g22170	FHY3 (FAR-RED ELONGATED HYPOCOTYLS 3)	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.99	Gma.12076.1.S1_at	CD410539	-	-	1e-45	At4g31860	protein phosphatase 2C, putative / PP2C, putative	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.98	GmaAffx.22333.1.S1_at	BI784750	-	-	1e-3	At3g12940	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.99	Gma.2802.1.S1_at	CD396311	-	-	2e-29	At3g06810	IBR3 (IBA-RESPONSE 3)	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.99	Gma.1806.1.S1_at	BI971557	-	-	5e-26	At2g23980	ATCNGC6	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.9	97.1	GSM293126	3_C038.1O.R9O1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM293105	20_C054.1O.R9O3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM294571	41_3212.2L.R9L3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM292258	78_C034.1B.R9B3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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