Co-expression analysis

Gene ID	GmaAffx.65773.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g19120: ERD3 (early-responsive to dehydration 3) (HF=2e-44)
Module size	6 genes
NF	0.05
%ile	17.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.97	GmaAffx.65773.1.S1_at	BI320311	-	-	2e-44	At4g19120	ERD3 (early-responsive to dehydration 3)	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.97	Gma.1479.2.S1_at	AW279120	-	-	6e-21	At4g19120	ERD3 (early-responsive to dehydration 3)	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.98	GmaAffx.84862.1.S1_at	AI965964	-	-	1e-29	At5g61240	protein binding	O.I.	H.G.	S.X.	Please select
0.12	15.1	0.98	GmaAffx.37006.2.S1_at	AI494839	-	-	2e-11	At4g20410	GSNAP (GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN)	O.I.	H.G.	S.X.	Please select
0.06	9.0	0.98	GmaAffx.56409.1.S1_at	BU965321	-	-	1e-16	At1g08750	GPI-anchor transamidase, putative	O.I.	H.G.	S.X.	Please select
0.01	3.4	0.98	Gma.7528.2.S1_at	BM891312	-	-	3e-49	At4g16143	IMPA-2 (IMPORTIN ALPHA ISOFORM 2)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1619493_at, orthologous to the query gene, GmaAffx.65773.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	1619493_at	At4g19120	hypothetical protein LOC100251016	-	2e-30	At4g19120	ERD3 (early-responsive to dehydration 3)	O.I.	H.G.	S.X.	Please select
0.91	98.8	1621698_at	At4g19120	similar to bHLH transcription factor Upa20	-	8e-2	At3g20510	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	1611979_at	At4g19120	hypothetical protein LOC100251016	-	1e-31	At4g19120	ERD3 (early-responsive to dehydration 3)	O.I.	H.G.	S.X.	Please select
0.63	84.3	1610418_at	At4g19120	hypothetical protein LOC100245385	-	8e-13	At1g20190	ATEXPA11 (ARABIDOPSIS THALIANA EXPANSIN 11)	O.I.	H.G.	S.X.	Please select
0.56	79.4	1615212_at	At4g19120	ripening-related protein-like	-	8e+0	At5g64040	PSAN	O.I.	H.G.	S.X.	Please select
0.50	72.7	1611561_a_at	At4g19120	hypothetical protein LOC100240998	-	2e-2	At4g36850	-	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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