Co-expression analysis

Gene ID GmaAffx.65773.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g19120: ERD3 (early-responsive to dehydration 3) (HF=2e-44)
Module size 6 genes
NF 0.05
%ile 17.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.97GmaAffx.65773.1.S1_atBI320311--2e-44At4g19120ERD3 (early-responsive to dehydration 3)O.I.H.G.S.X.
0.4463.30.97Gma.1479.2.S1_atAW279120--6e-21At4g19120ERD3 (early-responsive to dehydration 3)O.I.H.G.S.X.
0.3142.20.98GmaAffx.84862.1.S1_atAI965964--1e-29At5g61240protein bindingO.I.H.G.S.X.
0.1215.10.98GmaAffx.37006.2.S1_atAI494839--2e-11At4g20410GSNAP (GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN)O.I.H.G.S.X.
0.069.00.98GmaAffx.56409.1.S1_atBU965321--1e-16At1g08750GPI-anchor transamidase, putativeO.I.H.G.S.X.
0.013.40.98Gma.7528.2.S1_atBM891312--3e-49At4g16143IMPA-2 (IMPORTIN ALPHA ISOFORM 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os10g0569300, orthologous to the query gene, GmaAffx.65773.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8395.8Os10g0569300At4g19120-Putative methyltransferase DUF248 family protein3e-10At1g26850dehydration-responsive family proteinO.I.H.G.S.X.
0.5573.7Os01g0870100At4g19120-DMI1 protein1e-63At5g49960binding / catalyticO.I.H.G.S.X.
0.5068.0Os03g0655600At4g19120-FAR1 domain containing protein5e-1At1g47970unknown proteinO.I.H.G.S.X.
0.4458.1Os06g0693700At4g19120--2e-1At5g02570histone H2B, putativeO.I.H.G.S.X.
0.3644.0Os11g0515500At4g19120-Conserved hypothetical protein1e-1At3g26810AFB2 (AUXIN SIGNALING F-BOX 2)O.I.H.G.S.X.
0.2524.1Os04g0643600At4g19120-Cyclic nucleotide-gated channel C (Fragment)9e-9At5g57940ATCNGC5 (CYCLIC NUCLEOTIDE GATED CHANNEL 5)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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