Co-expression analysis

Gene ID	GmaAffx.65419.2.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g51890: leucine-rich repeat protein kinase, putative (HF=4e-3)
Module size	6 genes
NF	0.01
%ile	3.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.83	GmaAffx.65419.2.S1_at	BU762206	-	-	4e-3	At1g51890	leucine-rich repeat protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.81	Gma.4525.1.S1_at	BI967718	-	-	3e-1	At1g09560	GLP5 (GERMIN-LIKE PROTEIN 5)	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.81	GmaAffx.65419.1.S1_at	CD405955	-	-	1e-6	At2g43230	serine/threonine protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.09	12.0	0.91	GmaAffx.78940.1.A1_at	BU550755	-	-	5e-3	At1g77290	tetrachloro-p-hydroquinone reductive dehalogenase-related	O.I.	H.G.	S.X.	Please select
-	1.4	0.91	Gma.12536.2.A1_at	CD401630	-	-	3e+0	At4g28390	AAC3 (ADP/ATP CARRIER 3)	O.I.	H.G.	S.X.	Please select
-	1.4	0.92	GmaAffx.52122.2.S1_at	CA784199	-	-	3e-16	At5g56630	PFK7 (PHOSPHOFRUCTOKINASE 7)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.7	99.1	GSM209598	resistant_48hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
7.0	98.8	GSM209599	susceptible_48hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
6.7	98.7	GSM209581	susceptible_48hours_rep1	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
5.9	98.5	GSM170928	V2 Control, biological rep3	GSE7108	Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
5.2	98.1	GSM170926	Rust Innoculated, biological rep1	GSE7108	Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
5.1	98.1	GSM209580	resistant_48hours_rep1	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
5.0	98.0	GSM170927	Rust Innoculated, biological rep2	GSE7108	Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
4.6	97.7	GSM209590	susceptible_48hours_rep2	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
4.3	97.5	GSM209597	susceptible_24hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
4.2	97.4	GSM170924	V2 Control, biological rep1	GSE7108	Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
3.9	97.1	GSM209596	resistant_24hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.8	97.0	GSM170925	V2 Control, biological rep2	GSE7108	Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage
3.8	97.0	GSM209589	resistant_48hours_rep2	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.7	96.8	GSM209587	resistant_24hours_rep2	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.3	96.2	GSM209573	mock_0hours_rep1	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.2	96.0	GSM209582	mock_0hours_rep2	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.0	95.6	GSM170929	Rust Innoculated, biological rep3	GSE7108	Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stage

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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