Co-expression analysis

Gene ID GmaAffx.65419.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g43230: serine/threonine protein kinase, putative (HF=1e-6)
Module size 6 genes
NF 0.70
%ile 95.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7187.80.77GmaAffx.65419.1.S1_atCD405955--1e-6At2g43230serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.8392.50.76GmaAffx.72556.1.S1_atBG155109--6e+0At5g26262unknown proteinO.I.H.G.S.X.
0.8392.50.79Gma.16979.1.A1_atBG508042--2e-1At1g07900LBD1 (LOB DOMAIN-CONTAINING PROTEIN 1)O.I.H.G.S.X.
0.5576.30.78GmaAffx.2390.1.S1_atBE611763--2e-8At5g39000protein kinase family proteinO.I.H.G.S.X.
0.5374.20.76Gma.17093.1.A1_atAI966345--4e-1At3g27300G6PD5 (glucose-6-phosphate dehydrogenase 5)O.I.H.G.S.X.
0.5071.70.81Gma.15431.1.S1_atBG508249--7e-1At1g34490membrane bound O-acyl transferase (MBOAT) family protein / wax synthase-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
30.099.8GSM209598resistant_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
27.499.8GSM209599susceptible_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
7.298.9GSM170926Rust Innoculated, biological rep1GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
6.998.8GSM209597susceptible_24hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
6.598.7GSM209596resistant_24hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
6.498.6GSM209592resistant_6hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
4.597.7GSM245935Leaf_Water Control_Rep 3_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
4.597.7GSM209587resistant_24hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
4.397.5GSM170928V2 Control, biological rep3GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
4.397.5GSM209573mock_0hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
4.297.4GSM170927Rust Innoculated, biological rep2GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
3.897.0GSM245934Leaf_Water Control_Rep 2_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
3.696.7GSM209591mock_0hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
3.496.4GSM209580resistant_48hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
3.396.2GSM245933Leaf_Water Control_Rep 1_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
3.195.8GSM170929Rust Innoculated, biological rep3GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
3.195.8GSM209589resistant_48hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
3.095.6GSM170925V2 Control, biological rep2GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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