Co-expression analysis

Gene ID GmaAffx.65140.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g33670: L-galactose dehydrogenase (L-GalDH) (HF=7e-2)
Module size 6 genes
NF 0.60
%ile 90.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7187.80.98GmaAffx.65140.1.S1_atBI700031--7e-2At4g33670L-galactose dehydrogenase (L-GalDH)O.I.H.G.S.X.
0.6786.10.98Gma.17739.1.S1_atAW310535--4e-1At2g04220unknown proteinO.I.H.G.S.X.
0.6080.70.98Gma.11341.3.S1_s_atBM177332--8e-26At4g17900zinc-binding family proteinO.I.H.G.S.X.
0.5071.70.98Gma.11341.1.S1_atBG652352--2e-7At1g32700zinc-binding family proteinO.I.H.G.S.X.
0.5071.70.98GmaAffx.92436.1.S1_s_atCF806104--3e-8At1g72150PATL1 (PATELLIN 1)O.I.H.G.S.X.
0.3142.20.98GmaAffx.91848.1.S1_s_atCF807208--1e-58At3g20770EIN3 (ETHYLENE-INSENSITIVE3)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.095.6GSM2926537_C156.1I.V7I2P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage