Co-expression analysis

Gene ID	GmaAffx.64151.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g64410: OPT4 (OLIGOPEPTIDE TRANSPORTER 4) (HF=2e-32)
Module size	6 genes
NF	0.09
%ile	25.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.94	GmaAffx.64151.1.S1_at	BM887517	-	-	2e-32	At5g64410	OPT4 (OLIGOPEPTIDE TRANSPORTER 4)	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.99	GmaAffx.93620.1.S1_s_at	CF809345	-	-	3e-19	At3g61140	FUS6 (FUSCA 6)	O.I.	H.G.	S.X.	Please select
0.14	17.5	0.98	GmaAffx.56354.1.S1_at	BI701773	-	-	3e-51	At5g18190	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.11	14.2	0.98	GmaAffx.18860.1.S1_at	BE612054	-	-	3e-20	At4g12790	ATP-binding family protein	O.I.	H.G.	S.X.	Please select
0.07	10.2	0.98	Gma.5676.1.S1_s_at	AF126550.1	mannosyl-oligosaccharide 1,2-alpha-mannosidase	-	1e-86	At3g21160	mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative	O.I.	H.G.	S.X.	Please select
0.03	5.8	0.98	Gma.9706.3.S1_x_at	AW133151	-	-	2e-5	At2g39840	TOPP4	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage