Co-expression analysis

Gene ID GmaAffx.64090.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g29060: emb2726 (embryo defective 2726) (HF=2e-20)
Module size 7 genes
NF 0.66
%ile 93.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6786.10.96GmaAffx.64090.1.S1_atAW203536--2e-20At4g29060emb2726 (embryo defective 2726)O.I.H.G.S.X.
0.8693.00.96Gma.16479.2.S1_atBE191411--1e-2At5g27390-O.I.H.G.S.X.
0.7388.90.97Gma.8261.1.A1_s_atAW348445--1e-1At5g14910heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.6786.10.97Gma.10122.1.A1_atCD405211--3e-8At5g1432030S ribosomal protein S13, chloroplast (CS13)O.I.H.G.S.X.
0.6382.90.96Gma.1355.1.S1_atBU545782--1e-4At3g54210ribosomal protein L17 family proteinO.I.H.G.S.X.
0.6181.80.97Gma.10595.1.S1_atCD414051--2e-40At1g64510ribosomal protein S6 family proteinO.I.H.G.S.X.
0.4158.10.96Gma.2305.1.S1_atCD402601--2e-19At2g33800ribosomal protein S5 family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.799.4GSM238048Soybean-Mandarin-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
11.699.4GSM245938Leaf_LCO treated_Rep 3_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
11.099.4GSM238061Soybean-S03W4-5-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
10.399.3GSM238049Soybean-Mandarin-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
10.199.3GSM238052Soybean-PS46R-1-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
10.099.3GSM245937Leaf_LCO treated_Rep 2_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
9.699.2GSM238043Soybean-Bayfield-5-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
9.599.2GSM238041Soybean-Bayfield-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
9.399.2GSM238050Soybean-Mandarin-6-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
9.399.2GSM238051Soybean-Mandarin-7-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
9.199.2GSM238039Soybean-Bayfield-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
9.099.2GSM238031Soybean-2601R-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
8.999.2GSM245936Leaf_LCO treated_Rep 1_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
8.899.1GSM238036Soybean-Bayfield-1-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
8.899.1GSM245935Leaf_Water Control_Rep 3_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
8.799.1GSM238038Soybean-Bayfield-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
8.599.1GSM238060Soybean-S03W4-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
8.499.1GSM209581susceptible_48hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
8.499.1GSM238053Soybean-PS46R-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
8.399.1GSM238047Soybean-Mandarin-1-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
8.099.0GSM209580resistant_48hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
8.099.0GSM238033Soybean-2601R-5-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
8.099.0GSM238054Soybean-PS46R-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
7.899.0GSM238034Soybean-2601R-6-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
7.799.0GSM238055Soybean-PS46R-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
7.398.9GSM238056Soybean-PS46R-5-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
7.398.9GSM237070Soy_non-shoot apical meristem2GSE10607Genome-wide analysis of gene expression in the soybean shoot apical meristemLink to GEO
7.298.9GSM238058Soybean-S03W4-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
7.298.9GSM238032Soybean-2601R-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
7.198.8GSM238030Soybean-2601R-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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