Co-expression analysis

Gene ID	GmaAffx.63439.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g01510: AN (ANGUSTIFOLIA) (HF=3e-34)
Module size	6 genes
NF	0.39
%ile	68.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	74.2	0.98	GmaAffx.63439.1.S1_at	BQ628576	-	-	3e-34	At1g01510	AN (ANGUSTIFOLIA)	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.98	GmaAffx.29052.1.S1_at	BU577178	-	-	1e+0	At4g14600	-	O.I.	H.G.	S.X.	Please select
0.43	60.6	0.98	GmaAffx.64556.1.S1_at	BU549363	-	-	6e-28	At5g49880	mitotic checkpoint family protein	O.I.	H.G.	S.X.	Please select
0.43	60.6	0.98	Gma.10528.1.S1_at	BM270365	-	-	6e-25	At1g71350	eukaryotic translation initiation factor SUI1 family protein	O.I.	H.G.	S.X.	Please select
0.42	59.3	0.98	Gma.3544.1.S1_at	CD393919	-	-	1e-30	At1g25350	OVA9 (ovule abortion 9)	O.I.	H.G.	S.X.	Please select
0.20	25.1	0.98	Gma.3926.1.S1_at	BE801733	-	-	2e-38	At1g04080	PRP39	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.4	98.2	GSM309343	transgenic RNAiOleosin, biol rep 1, tech rep 1	GSE12300	Suppression of oleosin in soybean cotyledon
5.2	98.1	GSM309557	storage protein suppression expt, RNAi biol rep1, tech rep2	GSE12314	Storage Protein Suppression in Transgenic Soybean Cotyledons
5.2	98.1	GSM309341	Wild type 1	GSE12300	Suppression of oleosin in soybean cotyledon
5.2	98.1	GSM309342	Wild type 2	GSE12300	Suppression of oleosin in soybean cotyledon
5.1	98.1	GSM309529	storage protein suppression expt, RNAi biol rep1, tech rep1	GSE12314	Storage Protein Suppression in Transgenic Soybean Cotyledons
5.1	98.1	GSM309531	storage protein suppression expt, RNAi biol rep2, tech rep2	GSE12314	Storage Protein Suppression in Transgenic Soybean Cotyledons
5.1	98.1	GSM309528	storage protein suppression expt, control tech rep2	GSE12314	Storage Protein Suppression in Transgenic Soybean Cotyledons
4.9	98.0	GSM309530	storage protein suppression expt, RNAi biol rep2, tech rep1	GSE12314	Storage Protein Suppression in Transgenic Soybean Cotyledons
4.6	97.7	GSM309527	storage protein suppression expt, control tech rep1	GSE12314	Storage Protein Suppression in Transgenic Soybean Cotyledons
4.6	97.7	GSM309344	transgenic RNAiOleosin, biol rep 1, tech rep 2	GSE12300	Suppression of oleosin in soybean cotyledon
3.8	97.0	GSM267288	Axillary meristem from 10-day-old soybean seedlings repliacte 2	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
3.7	96.8	GSM309346	transgenic RNAiOleosin, biol rep 2, tech rep 2	GSE12300	Suppression of oleosin in soybean cotyledon
3.6	96.7	GSM237068	Soy_shoot apical meristem	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
3.6	96.7	GSM309345	transgenic RNAiOleosin, biol rep 2, tech rep 1	GSE12300	Suppression of oleosin in soybean cotyledon
3.6	96.7	GSM258502	Vegetative shoot apical meristem, replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.5	96.6	GSM267287	Axillary meristem from 10-day-old soybean seedlings	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
3.4	96.4	GSM237069	Soy_shoot apical meristem2	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem
3.4	96.4	GSM258501	Soybean shoot apical meristem, 1 short-day treatment replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.3	96.2	GSM258503	Soybean shoot apical meristem, 2 short-day replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.2	96.0	GSM258504	Soybean shoot apical meristem, 4 short-day replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.2	96.0	GSM258497	Soybean Shoot Apical Meristem, 1 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.2	96.0	GSM258499	Soybean shoot apical meristem, 4 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.2	96.0	GSM258496	Vegetative soybean shoot apical meristem	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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