Co-expression analysis

Gene ID GmaAffx.63375.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g02540: short-chain dehydrogenase/reductase (SDR) family protein (HF=4e+0)
Module size 32 genes
NF 0.26
%ile 50.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9799.80.95GmaAffx.63375.1.S1_atBM520503--4e+0At5g02540short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.3853.30.98GmaAffx.64406.1.S1_atBE823417--1e-9At1g11760unknown proteinO.I.H.G.S.X.
0.3853.30.97GmaAffx.91672.1.S1_s_atCF807397--5e-9At5g63490CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing proteinO.I.H.G.S.X.
0.3548.60.97Gma.4116.2.S1_atBM177935--6e-4At4g21010transcription initiation factor-relatedO.I.H.G.S.X.
0.3548.60.95GmaAffx.93010.1.S1_s_atCF808735--2e+0At5g65260polyadenylate-binding protein family protein / PABP family proteinO.I.H.G.S.X.
0.3447.20.98Gma.4136.1.S1_atBE824037--4e-20At5g05230ubiquitin-protein ligaseO.I.H.G.S.X.
0.3243.70.97Gma.3943.1.S1_atCD396571--4e-12At3g04610FLK (flowering locus KH domain)O.I.H.G.S.X.
0.3243.70.98Gma.2393.1.S1_atCD412274--2e-41At5g27030TPR3 (TOPLESS-RELATED 3)O.I.H.G.S.X.
0.3142.20.98Gma.4853.2.S1_a_atBU547313--2e-51At5g56290PEX5 (PEROXIN 5)O.I.H.G.S.X.
0.3142.20.97GmaAffx.21348.1.S1_atBE474732--9e-2At5g58020unknown proteinO.I.H.G.S.X.
0.3142.20.98Gma.5056.1.S1_atBI970673--1e-2At3g22170FHY3 (FAR-RED ELONGATED HYPOCOTYLS 3)O.I.H.G.S.X.
0.3142.20.98Gma.1249.1.S1_atBE806938--2e-5At3g21610-O.I.H.G.S.X.
0.3142.20.98GmaAffx.69858.1.A1_atBU547559--5e+0At5g48080-O.I.H.G.S.X.
0.3040.40.97Gma.8313.1.S1_atBG511731--7e-1At1g29410PAI3 (phosphoribosylanthranilate isomerase 3)O.I.H.G.S.X.
0.2939.00.98Gma.8652.1.A1_atCD407809--3e-1At1g48160signal recognition particle 19 kDa protein, putative / SRP19, putativeO.I.H.G.S.X.
0.2939.00.98GmaAffx.82.1.S1_atCD415578--9e-8At3g10210-O.I.H.G.S.X.
0.2939.00.98Gma.8550.1.S1_a_atBM092281--1e-160At5g09740HAM2 (histone acetyltransferase of the MYST family 2)O.I.H.G.S.X.
0.2839.00.97GmaAffx.84359.1.S1_atBM955089--7e-9At3g55460SCL30O.I.H.G.S.X.
0.2735.70.98Gma.13320.1.S1_atBE802768--4e-7At5g64180unknown proteinO.I.H.G.S.X.
0.2633.90.95GmaAffx.39073.1.S1_atAW277379--4e-3At3g12830auxin-responsive family proteinO.I.H.G.S.X.
0.2633.90.98Gma.7121.2.S1_a_atBF426012--1e-7At2g30530unknown proteinO.I.H.G.S.X.
0.2532.60.97Gma.7167.1.S1_atBI968922--1e-13At2g16640TOC132 (MULTIMERIC TRANSLOCON COMPLEX IN THE OUTER ENVELOPE MEMBRANE 132)O.I.H.G.S.X.
0.2329.90.98Gma.12601.1.S1_atCD392236--6e-50At5g67320HOS15 (high expression of osmotically responsive genes 15)O.I.H.G.S.X.
0.2025.10.97Gma.13215.1.S1_atBU083989--9e-1At2g32905unknown proteinO.I.H.G.S.X.
0.2025.10.98PsAffx.psHB027xN03f_atPsAffx.psHB027xN03f--4e+0At5g47075LCR20 (Low-molecular-weight cysteine-rich 20)O.I.H.G.S.X.
0.2025.10.98GmaAffx.56338.1.S1_atBU765079--2e-37At5g13010EMB3011 (embryo defective 3011)O.I.H.G.S.X.
0.2025.10.97GmaAffx.82598.1.S1_atBU083489--3e-16At5g59830unknown proteinO.I.H.G.S.X.
0.1822.30.98Gma.2238.1.S1_atBM893125--4e-76At3g55620emb1624 (embryo defective 1624)O.I.H.G.S.X.
0.1619.70.97GmaAffx.2763.1.S1_atBU550943--5e+0At5g67600unknown proteinO.I.H.G.S.X.
0.1316.30.98Gma.13522.1.S1_atAW101034--8e-2At5g11040-O.I.H.G.S.X.
0.1316.30.97GmaAffx.56116.1.A1_atBU544778--2e-1At1g12760protein binding / ubiquitin-protein ligase/ zinc ion bindingO.I.H.G.S.X.
0.0912.00.97Gma.16237.2.S1_atBG045627--5e-6At1g17210zinc ion bindingO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.496.4GSM209585resistant_12hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
3.496.4GSM2931263_C038.1O.R9O1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.396.2GSM209591mock_0hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
3.296.0GSM29310520_C054.1O.R9O3P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM209594resistant_12hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
3.195.8GSM29225878_C034.1B.R9B3P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM29413286_3112.2G.R9G1P, Experimental replicate 2GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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