Co-expression analysis

Gene ID	GmaAffx.63137.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g26740: ATS1 (ARABIDOPSIS THALIANA SEED GENE 1) (HF=2e-6)
Module size	6 genes
NF	0.07
%ile	22.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.40	57.1	0.93	GmaAffx.63137.1.S1_at	BG043541	-	-	2e-6	At4g26740	ATS1 (ARABIDOPSIS THALIANA SEED GENE 1)	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.93	GmaAffx.91561.1.S1_s_at	CF807286	-	-	3e-4	At5g58070	TIL (TEMPERATURE-INDUCED LIPOCALIN)	O.I.	H.G.	S.X.	Please select
0.24	30.9	0.93	GmaAffx.55896.1.S1_at	BI975050	-	-	6e-2	At2g10920	unknown protein	O.I.	H.G.	S.X.	Please select
0.15	18.7	0.93	Gma.14614.1.S1_at	CD409596	-	-	4e-1	At2g30620	histone H1.2	O.I.	H.G.	S.X.	Please select
0.09	12.0	0.93	Gma.5631.1.S1_at	CD405214	-	-	1e-4	At5g23810	AAP7	O.I.	H.G.	S.X.	Please select
0.02	4.5	0.93	Gma.11299.3.S1_x_at	BG045664	-	-	3e-25	At5g28840	GME (GDP-D-MANNOSE 3',5'-EPIMERASE)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.8	97.0	GSM293882	33_3082.2E.SLE2P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM294618	84_3204.2L.SLL1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM209587	resistant_24hours_rep2	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.5	96.6	GSM294237	86_3142.2H.SLH3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM293998	51_3092.2F.SLF1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM209582	mock_0hours_rep2	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.4	96.4	GSM294567	38_3214.2L.SLL3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM293431	21_C094.1R.SLR1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM293267	52_C060.1P.SLP1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM293461	49_C104.1R.SLR3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM293952	9_3078.2E.SLE1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM294296	48_3150.2I.SLI1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM293390	74_1588.1Q.R230P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM294277	30_3152.2I.SLI2P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM294236	85_3128.2H.SLH1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM293331	20_C078.1Q.SLQ1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM294405	62_3164.2J.SLJ1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage