Co-expression analysis

Gene ID GmaAffx.6270.3.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g43640: AtTLP5 (TUBBY LIKE PROTEIN 5) (HF=1e-14)
Module size 6 genes
NF 0.14
%ile 34.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.97GmaAffx.6270.3.S1_atCA800259--1e-14At1g43640AtTLP5 (TUBBY LIKE PROTEIN 5)O.I.H.G.S.X.
0.3548.60.98GmaAffx.54047.1.S1_atBG509987--3e-1At1g65270unknown proteinO.I.H.G.S.X.
0.1518.70.98GmaAffx.88360.1.S1_atBQ473502--1e-7At1g71980protease-associated zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.0811.00.98GmaAffx.89525.1.S1_s_atCK606517--3e-26At2g39840TOPP4O.I.H.G.S.X.
0.0811.00.98GmaAffx.90994.1.S1_s_atCF806719--7e-12At4g11410short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.058.00.98Gma.17924.2.S1_atBF071644--2e-14At5g17440LUC7 N_terminus domain-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage