Co-expression analysis

Gene ID GmaAffx.60645.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g53300: CYP71B31 (HF=2e-4)
Module size 25 genes
NF 0.26
%ile 51.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8693.00.77GmaAffx.60645.1.S1_atBI701603--2e-4At3g53300CYP71B31O.I.H.G.S.X.
0.5778.80.90Gma.11528.2.S1_x_atBG316001--3e-1Atmg00750-O.I.H.G.S.X.
0.5374.20.75GmaAffx.60645.2.S1_s_atBQ742710--8e-1At5g26810pectinesterase family proteinO.I.H.G.S.X.
0.5172.30.93Gma.5173.1.S1_atAW707000--2e+0At5g53200TRY (TRIPTYCHON)O.I.H.G.S.X.
0.4968.30.92Gma.5173.2.S1_atBM270690--3e+0At5g17140cysteine proteinase-relatedO.I.H.G.S.X.
0.4158.10.81GmaAffx.60645.2.S1_atBQ742710--8e-1At5g26810pectinesterase family proteinO.I.H.G.S.X.
0.4057.10.90GmaAffx.81346.2.S1_atBU083613--8e-14At5g47900unknown proteinO.I.H.G.S.X.
0.3751.70.93GmaAffx.53833.1.S1_atAW185395--6e-14At5g35220EGY1 (ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN 1)O.I.H.G.S.X.
0.3548.60.89GmaAffx.73345.1.S1_s_atBQ454088--2e-1At4g13320unknown proteinO.I.H.G.S.X.
0.3243.70.92GmaAffx.72621.1.S1_atAW201860--6e-8At3g02720DJ-1 family protein / protease-relatedO.I.H.G.S.X.
0.2735.70.92GmaAffx.57621.1.S1_atBQ296739--8e-3At2g29670bindingO.I.H.G.S.X.
0.2633.90.94GmaAffx.69356.1.S1_atBE022033--1e-38At5g26742emb1138 (embryo defective 1138)O.I.H.G.S.X.
0.2532.60.94GmaAffx.69339.3.S1_atBQ272709--1e-3At2g36990SIGF (RNA POLYMERASE SIGMA-SUBUNIT F)O.I.H.G.S.X.
0.2430.90.92Gma.2659.2.S1_atBM891837--8e-26At1g11430plastid developmental protein DAG, putativeO.I.H.G.S.X.
0.2430.90.93GmaAffx.85098.1.S1_atBG404890--3e-1At3g46750unknown proteinO.I.H.G.S.X.
0.2329.90.94Gma.2574.1.S1_a_atBI469532--3e-38At1g10760SEX1 (STARCH EXCESS 1)O.I.H.G.S.X.
0.2126.60.93Gma.14800.2.S1_atBE610029--3e-27At3g07670SET domain-containing proteinO.I.H.G.S.X.
0.1923.70.92GmaAffx.77250.1.S1_atBG882176--1e-15At1g04620coenzyme F420 hydrogenase family / dehydrogenase, beta subunit familyO.I.H.G.S.X.
0.1721.20.93GmaAffx.45589.1.S1_atBG882015--5e-2At2g20613unknown proteinO.I.H.G.S.X.
0.1721.20.95Gma.1781.2.S1_atBE802569--3e-44At5g14260SET domain-containing proteinO.I.H.G.S.X.
0.1518.70.93Gma.10458.3.S1_a_atBM178487--6e+0At5g24640unknown proteinO.I.H.G.S.X.
0.1417.50.91Gma.4901.2.S1_atBF071542--2e-4At2g21780unknown proteinO.I.H.G.S.X.
0.1215.10.93GmaAffx.59687.1.S1_atBI946038--4e-16At3g12080emb2738 (embryo defective 2738)O.I.H.G.S.X.
0.0710.20.90GmaAffx.83297.1.S1_atBQ785854--1e-6At2g22360DNAJ heat shock family proteinO.I.H.G.S.X.
0.0710.20.93GmaAffx.57668.1.S1_atBM567837--8e-3At2g42610LSH10 (LIGHT SENSITIVE HYPOCOTYLS 10)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.399.6GSM245936Leaf_LCO treated_Rep 1_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
13.899.5GSM245937Leaf_LCO treated_Rep 2_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
13.699.5GSM245934Leaf_Water Control_Rep 2_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
13.499.5GSM245933Leaf_Water Control_Rep 1_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
11.699.4GSM245938Leaf_LCO treated_Rep 3_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
11.399.4GSM245935Leaf_Water Control_Rep 3_48 h After TreatmentGSE9730Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.Link to GEO
9.399.2GSM209590susceptible_48hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
6.198.5GSM209581susceptible_48hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
5.898.4GSM238041Soybean-Bayfield-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
5.698.3GSM209589resistant_48hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
5.298.1GSM238038Soybean-Bayfield-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
5.098.0GSM209582mock_0hours_rep2GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
5.098.0GSM209592resistant_6hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
4.998.0GSM238031Soybean-2601R-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
4.697.7GSM238048Soybean-Mandarin-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
4.697.7GSM238052Soybean-PS46R-1-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
4.697.7GSM238060Soybean-S03W4-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
4.597.7GSM238051Soybean-Mandarin-7-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
4.597.7GSM238050Soybean-Mandarin-6-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
4.597.7GSM238055Soybean-PS46R-4-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
4.397.5GSM238039Soybean-Bayfield-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
4.397.5GSM209573mock_0hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
4.297.4GSM209580resistant_48hours_rep1GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
4.197.3GSM170928V2 Control, biological rep3GSE7108Gene expression analysis in soybean with respect to Pahakopsora pachyrhizii at V2 growth stageLink to GEO
4.197.3GSM209599susceptible_48hours_rep3GSE8432Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhiziLink to GEO
4.097.2GSM238054Soybean-PS46R-3-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
3.897.0GSM238033Soybean-2601R-5-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
3.897.0GSM238053Soybean-PS46R-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
3.696.7GSM238058Soybean-S03W4-2-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO
3.696.7GSM238036Soybean-Bayfield-1-RMAGSE9374Exploration of microarrays as tools to assess substantial equivalence of genetically modified soybeansLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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