Co-expression analysis

Gene ID GmaAffx.60216.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g16740: ATTPS03 (HF=9e-4)
Module size 6 genes
NF 0.29
%ile 54.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.60.78GmaAffx.60216.1.S1_atBM527040--9e-4At4g16740ATTPS03O.I.H.G.S.X.
0.3548.60.98GmaAffx.88908.1.A1_x_atCK605775--2e-28At5g59880ADF3 (ACTIN DEPOLYMERIZING FACTOR 3)O.I.H.G.S.X.
0.2939.00.97Gma.16125.1.S1_atBQ298270--6e-46At3g61110ARS27A (ARABIDOPSIS RIBOSOMAL PROTEIN S27)O.I.H.G.S.X.
0.2939.00.98GmaAffx.91487.1.S1_x_atCF807212elongation factor 1A SMV resistance-related protein-2e-114At5g60390elongation factor 1-alpha / EF-1-alphaO.I.H.G.S.X.
0.2735.70.96GmaAffx.1898.1.S1_atBU578959--1e+0At1g1593040S ribosomal protein S12 (RPS12A)O.I.H.G.S.X.
0.0912.00.98Gma.6150.2.S1_x_atCD416056--1e-23At5g59880ADF3 (ACTIN DEPOLYMERIZING FACTOR 3)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.098.5GSM182035Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
5.098.0GSM182032Laser capture microdissected (LCM) suspensor at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.998.0GSM201106Laser capture microdissected (LCM) axis vascular bundle at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.497.6GSM147945Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
4.397.5GSM147946Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
4.297.4GSM191084Soybean_Cotyledon_EPD2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.197.3GSM201099Laser capture microdissected (LCM) axis plumule at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.197.3GSM147939Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
4.197.3GSM201097Laser capture microdissected (LCM) axis epidermis at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.097.2GSM201096Laser capture microdissected (LCM) axis epidermis at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.997.1GSM147940Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.997.1GSM147951Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.997.1GSM201118Laser capture microdissected (LCM) seed coat aleurone at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.997.1GSM147950Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.997.1GSM191077Soybean_Cotyledon_SUS1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
3.897.0GSM201103Laser capture microdissected (LCM) axis root meristem at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.897.0GSM191086Soybean_Cotyledon_HI2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
3.796.8GSM147942Laser capture microdissected (LCM) endothelium at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.796.8GSM147941Laser capture microdissected (LCM) endosperm at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.796.8GSM147949Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.696.7GSM201107Laser capture microdissected (LCM) axis vascular bundle at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.696.7GSM147947Laser capture microdissected (LCM) epidermis at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.696.7GSM201113Laser capture microdissected (LCM) cotyledon adaxial epidermis at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.696.7GSM201098Laser capture microdissected (LCM) axis plumule at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.596.6GSM201104Laser capture microdissected (LCM) axis shoot meristem at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.596.6GSM191085Soybean_Cotyledon_HI1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
3.596.6GSM147944Laser capture microdissected (LCM) endothelium at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.596.6GSM147953Laser capture microdissected (LCM) inner integument at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
3.496.4GSM201105Laser capture microdissected (LCM) axis shoot meristem at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.496.4GSM182036Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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