Co-expression analysis

Gene ID	GmaAffx.59462.1.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At4g12530: protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (HF=2e-1)
Module size	6 genes
NF	0.20
%ile	42.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.48	67.7	0.96	GmaAffx.59462.1.S1_s_at	BI469429	-	-	2e-1	At4g12530	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	H.G.	S.X.	Please select
0.55	76.3	0.97	Gma.4877.1.S1_a_at	BM885097	-	-	1e-7	At1g07180	NDA1 (ALTERNATIVE NAD(P)H DEHYDROGENASE 1)	O.I.	H.G.	S.X.	Please select
0.29	39.0	0.96	Gma.11007.1.S1_a_at	CA850791	-	-	2e-2	At3g22240	unknown protein	O.I.	H.G.	S.X.	Please select
0.27	35.7	0.97	GmaAffx.91411.1.S1_x_at	CF807136	-	-	1e-8	At1g07180	NDA1 (ALTERNATIVE NAD(P)H DEHYDROGENASE 1)	O.I.	H.G.	S.X.	Please select
0.27	35.7	0.97	GmaAffx.1301.74.S1_s_at	AW704103	-	-	2e-1	At4g16140	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.07	10.2	0.96	Gma.16706.1.S1_s_at	BU551340	-	-	6e-20	At3g60100	CSY5 (citrate synthase 5)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.1	95.8	GSM293595	26_2077.2B.R246U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM171632	18_W.E.I.3, Experimental replicate W	GSE7124	Plant and pathogen gene expression during infection by P.sojae of 8 soybean cultivars varying in quantitative resistance

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage