Co-expression analysis

Gene ID	GmaAffx.59249.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g29720: protein kinase family protein (HF=9e-8)
Module size	6 genes
NF	0.02
%ile	11.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.80	GmaAffx.59249.1.S1_at	AW568064	-	-	9e-8	At1g29720	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.16	19.7	0.89	Gma.3919.2.S1_x_at	BU546127	-	-	6e-50	At1g10200	WLIM1	O.I.	H.G.	S.X.	Please select
0.08	11.0	0.89	GmaAffx.33954.1.S1_at	AW568231	-	-	2e-14	At3g05540	-	O.I.	H.G.	S.X.	Please select
0.02	4.5	0.90	GmaAffx.48585.1.S1_at	BE824372	-	-	2e-2	At5g28960	unknown protein	O.I.	H.G.	S.X.	Please select
0.01	3.4	0.90	GmaAffx.55896.1.S1_at	BI975050	-	-	6e-2	At2g10920	unknown protein	O.I.	H.G.	S.X.	Please select
0.01	3.4	0.91	GmaAffx.43457.1.S1_at	BM891228	-	-	3e-1	At1g21830	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.7	96.8	GSM294132	86_3112.2G.R9G1P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM293105	20_C054.1O.R9O3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM245933	Leaf_Water Control_Rep 1_48 h After Treatment	GSE9730	Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
3.4	96.4	GSM294218	69_3140.2H.R9H3P_new, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM209591	mock_0hours_rep3	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.2	96.0	GSM245934	Leaf_Water Control_Rep 2_48 h After Treatment	GSE9730	Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.
3.2	96.0	GSM209582	mock_0hours_rep2	GSE8432	Expression survey of Rpp1 soybean line PI200492 resistant to P. pachyrhizi
3.1	95.8	GSM293390	74_1588.1Q.R230P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM294571	41_3212.2L.R9L3P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM293126	3_C038.1O.R9O1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM245936	Leaf_LCO treated_Rep 1_48 h After Treatment	GSE9730	Effect of foliar spray of lipo-chitooligosaccharide (Nod factor) on soybean leaf gene expression.

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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