Co-expression analysis

Gene ID	GmaAffx.59154.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g37685: unknown protein (HF=7e+0)
Module size	6 genes
NF	0.35
%ile	62.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	71.7	0.96	GmaAffx.59154.1.S1_at	BG508624	-	-	7e+0	At4g37685	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	76.3	0.96	GmaAffx.87526.1.S1_at	BM954581	-	-	6e+0	At5g63470	NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4)	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.96	GmaAffx.78968.2.S1_at	BM188587	-	-	9e-13	At5g39670	calcium-binding EF hand family protein	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.97	GmaAffx.86361.1.S1_s_at	BG508205	alternative oxidase 2b	-	4e-9	At3g27620	AOX1C	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.97	GmaAffx.91355.1.S1_s_at	CF807080	alternative oxidase 2b	-	7e-5	At5g64210	AOX2	O.I.	H.G.	S.X.	Please select
0.12	15.1	0.96	Gma.2143.1.S1_at	BE659691	-	-	2e-60	At1g77810	galactosyltransferase family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.4	97.6	GSM292422	25_1253.1G.R161U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM292414	18_1265.1G.R168U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM292216	8-1023.1A.R013L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM292208	70_C004.1A.R9A1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM292249	63_1047.1B.R027U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM292320	68_1189.1E.R115U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM292213	76_1023.1A.R013U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM292433	35_1253.1G.R161L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM292370	44_1227.1F.R139U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM292218	86-C016.1A.V7A3P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM292238	45_1051.1B.R029L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM292158	10_C010.1A.R9A2P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM292318	66_1177.1E.R109L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM292458	58_1257.1G.R164U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM292327	74_1189.1E.R115L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM292246	60_1047.1B.R027L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage