Co-expression analysis

Gene ID GmaAffx.58029.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g51860: MADS-box protein (AGL72) (HF=4e+0)
Module size 16 genes
NF 0.23
%ile 47.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9499.20.96GmaAffx.58029.1.S1_atBE059765--4e+0At5g51860MADS-box protein (AGL72)O.I.H.G.S.X.
0.3650.80.97GmaAffx.72876.1.S1_atAI736301WRKY35 protein-5e-13At4g26640WRKY20O.I.H.G.S.X.
0.3346.10.98GmaAffx.84808.1.S1_atAW397707--8e-10At5g03280EIN2 (ETHYLENE INSENSITIVE 2)O.I.H.G.S.X.
0.3243.70.98Gma.6833.1.S1_atBU545297--9e-12At5g11710epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedO.I.H.G.S.X.
0.2939.00.98Gma.10247.1.S1_atCD410794--6e+0At5g45870Bet v I allergen family proteinO.I.H.G.S.X.
0.2839.00.97Gma.5653.1.S1_atCD404693--2e-1At3g49770unknown proteinO.I.H.G.S.X.
0.2633.90.98GmaAffx.74684.1.S1_atBU547287--1e+0At1g27970NTF2B (NUCLEAR TRANSPORT FACTOR 2B)O.I.H.G.S.X.
0.2430.90.98Gma.10799.1.S1_atBG237181--4e-96At4g26100CK1 (CASEIN KINASE 1)O.I.H.G.S.X.
0.2228.10.98Gma.3839.1.S1_a_atCD391787--2e-69At1g60780HAP13 (HAPLESS 13)O.I.H.G.S.X.
0.1822.30.98GmaAffx.16660.1.S1_atBG509055--5e-7At3g09090DEX1 (DEFECTIVE IN EXINE FORMATION 1)O.I.H.G.S.X.
0.1518.70.98Gma.4379.1.S1_a_atCD393195--1e-23At4g11150TUF (VACUOLAR ATP SYNTHASE SUBUNIT E1)O.I.H.G.S.X.
0.1417.50.98Gma.10016.1.S1_atCA852632--1e-81At1g59900AT-E1 ALPHAO.I.H.G.S.X.
0.1417.50.98Gma.6150.2.S1_x_atCD416056--1e-23At5g59880ADF3 (ACTIN DEPOLYMERIZING FACTOR 3)O.I.H.G.S.X.
0.1316.30.98Gma.17906.1.S1_s_atBI702059--2e-11At2g20280zinc finger (CCCH-type) family proteinO.I.H.G.S.X.
0.1316.30.98Gma.17869.1.S1_atAW156331--1e+0At1g61250SC3 (SECRETORY CARRIER 3)O.I.H.G.S.X.
0.1013.00.98GmaAffx.92496.1.S1_s_atCF808221--1e-75At1g78870UBC35 (UBIQUITIN-CONJUGATING ENZYME 35)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.997.1GSM191087Soybean_Cotyledon_II1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
3.897.0GSM191088Soybean_Cotyledon_II2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
3.796.8GSM201120Laser capture microdissected (LCM) seed coat hourglass at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.796.8GSM201130Laser capture microdissected (LCM) endosperm at the heart stage, biological replicate 3GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
3.696.7GSM201121Laser capture microdissected (LCM) seed coat hourglass at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.696.7GSM201127Laser capture microdissected (LCM) seed coat parenchyma at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.596.6GSM201122Laser capture microdissected (LCM) seed coat hilum at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.296.0GSM201126Laser capture microdissected (LCM) seed coat parenchyma at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
3.195.8GSM191079Soybean_Cotyledon_ES1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
3.195.8GSM191092Soybean_Cotyledon_SEED2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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