Co-expression analysis

Gene ID	GmaAffx.56409.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g08750: GPI-anchor transamidase, putative (HF=1e-16)
Module size	6 genes
NF	0.46
%ile	77.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.6	0.99	GmaAffx.56409.1.S1_at	BU965321	-	-	1e-16	At1g08750	GPI-anchor transamidase, putative	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.99	GmaAffx.27367.1.S1_at	BG653618	-	-	7e-9	At1g79690	atnudt3 (Arabidopsis thaliana Nudix hydrolase homolog 3)	O.I.	H.G.	S.X.	Please select
0.43	60.6	0.99	Gma.8209.1.S1_at	BU546771	-	-	2e-47	At5g58100	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.99	GmaAffx.87924.1.S1_at	AW596893	-	-	9e-39	At3g05000	transport protein particle (TRAPP) component Bet3 family protein	O.I.	H.G.	S.X.	Please select
0.35	48.6	0.99	Gma.17905.2.S1_at	CD393233	-	-	8e-37	At4g01320	ATSTE24	O.I.	H.G.	S.X.	Please select
0.26	33.9	0.99	GmaAffx.90062.1.S1_s_at	CF805787	-	-	1e-108	At1g53750	RPT1A (REGULATORY PARTICLE TRIPLE-A 1A)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.8	97.0	GSM258499	Soybean shoot apical meristem, 4 short-day treatment	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.4	96.4	GSM258502	Vegetative shoot apical meristem, replicate B	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.3	96.2	GSM258496	Vegetative soybean shoot apical meristem	GSE10251	Gene expression profiling implicates novel hormonal regulation of the floral initiation process in soybeans
3.0	95.6	GSM267287	Axillary meristem from 10-day-old soybean seedlings	GSE10607	Genome-wide analysis of gene expression in the soybean shoot apical meristem

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage