Co-expression analysis

Gene ID GmaAffx.55686.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g43560: meprin and TRAF homology domain-containing protein / MATH domain-containing protein (HF=7e-7)
Module size 8 genes
NF 0.50
%ile 81.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8291.90.98GmaAffx.55686.1.S1_atBI970602--7e-7At5g43560meprin and TRAF homology domain-containing protein / MATH domain-containing proteinO.I.H.G.S.X.
0.7187.80.98GmaAffx.93627.1.S1_s_atCF809352--2e-44At5g18620CHR17 (CHROMATIN REMODELING FACTOR17)O.I.H.G.S.X.
0.7187.80.98Gma.8340.1.S1_atAW201258--3e-3At1g72390unknown proteinO.I.H.G.S.X.
0.4766.60.98Gma.12601.1.S1_atCD392236--6e-50At5g67320HOS15 (high expression of osmotically responsive genes 15)O.I.H.G.S.X.
0.3853.30.98Gma.13522.1.S1_atAW101034--8e-2At5g11040-O.I.H.G.S.X.
0.3751.70.98Gma.5056.1.S1_atBI970673--1e-2At3g22170FHY3 (FAR-RED ELONGATED HYPOCOTYLS 3)O.I.H.G.S.X.
0.3548.60.98GmaAffx.56338.1.S1_atBU765079--2e-37At5g13010EMB3011 (embryo defective 3011)O.I.H.G.S.X.
0.3548.60.98Gma.8652.1.A1_atCD407809--3e-1At1g48160signal recognition particle 19 kDa protein, putative / SRP19, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.596.6GSM2931263_C038.1O.R9O1P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO
3.195.8GSM29310520_C054.1O.R9O3P, Experimental replicate 1GSE11611Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojaeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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