Co-expression analysis

Gene ID GmaAffx.55680.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g56750: Ndr family protein (HF=2e-44)
Module size 6 genes
NF 0.61
%ile 90.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7187.80.96GmaAffx.55680.1.S1_atBE475029--2e-44At5g56750Ndr family proteinO.I.H.G.S.X.
0.6786.10.98GmaAffx.73080.1.S1_atBI427357--2e-1At4g21620glycine-rich proteinO.I.H.G.S.X.
0.6382.90.97GmaAffx.36562.2.S1_atBM731207--5e-15At1g14970unknown proteinO.I.H.G.S.X.
0.5071.70.98Gma.13878.1.S1_atCD408791--5e+0At5g01070zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.5071.70.98GmaAffx.51022.1.S1_atBM519886--9e-1At3g25920RPL15O.I.H.G.S.X.
0.4766.60.97GmaAffx.73253.1.S1_atBI786637--3e-1At5g56550OXS3 (OXIDATIVE STRESS 3)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
40.599.9GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
25.899.8GSM308559Mature Soybean (Glycine max) pollen grains Replicate 2GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
24.299.8GSM308560Mature Soybean (Glycine max) pollen grains Replicate 3GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO

Inter-species module comparison

A co-expression module including the maize gene, ZmAffx.501.1.S1_at, orthologous to the query gene, GmaAffx.55680.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9299.2ZmAffx.501.1.S1_atAt5g56750--8e-1At5g62100ATBAG2 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 2)O.I.H.G.S.X.
0.5976.1ZmAffx.361.1.A1_atAt5g56750--8e-1At1g15800unknown proteinO.I.H.G.S.X.
0.5674.4Zm.13913.1.S1_s_atAt5g56750ROA protein 1 /// replication origin activator 2 /// replication origin activator 4-8e-11At5g46280DNA replication licensing factor, putativeO.I.H.G.S.X.
0.5674.4Zm.10390.1.A1_atAt5g56750hypothetical protein LOC100193343-2e+0At1g19600pfkB-type carbohydrate kinase family proteinO.I.H.G.S.X.
0.5571.6Zm.13899.1.S1_x_atAt5g56750R2R3MYB-domain protein-6e-2At4g37780MYB87 (MYB DOMAIN PROTEIN 87)O.I.H.G.S.X.
0.5469.8Zm.762.1.A1_a_atAt5g56750--1e-4At3g05740RECQI1 (Arabidopsis RecQ helicase l1)O.I.H.G.S.X.
0.5267.3ZmAffx.29.1.S1_atAt5g56750--2e-1At1g65445transferase-relatedO.I.H.G.S.X.
0.5267.3ZmAffx.370.1.S1_atAt5g56750--3e+0At2g42610LSH10 (LIGHT SENSITIVE HYPOCOTYLS 10)O.I.H.G.S.X.
0.5166.4ZmAffx.375.1.A1_atAt5g56750--3e+0At1g35340ATP-dependent protease La (LON) domain-containing proteinO.I.H.G.S.X.
0.4861.3ZmAffx.338.1.S1_atAt5g56750--3e+0At4g12460ORP2B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2B)O.I.H.G.S.X.
0.4759.9ZmAffx.328.1.A1_atAt5g56750--3e+0At3g07510unknown proteinO.I.H.G.S.X.
0.4759.9RPTR-Zm-J01347-1_atAt5g56750--O.I.H.G.S.X.
0.4658.4ZmAffx.366.1.A1_atAt5g56750--5e+0At3g63350AT-HSFA7BO.I.H.G.S.X.
0.4556.4RPTR-Zm-J01347-2_atAt5g56750--O.I.H.G.S.X.
0.4455.7ZmAffx.452.1.A1_atAt5g56750--3e-6At3g03380DegP7 (DegP protease 7)O.I.H.G.S.X.
0.4455.7RPTR-Zm-ECOLOXL_atAt5g56750--O.I.H.G.S.X.
0.4251.3Zm.11965.1.A1_atAt5g56750hypothetical protein LOC100275559-2e+0At1g06070bZIP transcription factor, putative (bZIP69)O.I.H.G.S.X.
0.4251.3ZmAffx.649.1.S1_atAt5g56750--3e+0At4g22000unknown proteinO.I.H.G.S.X.
0.4149.7ZmAffx.675.1.A1_atAt5g56750--3e+0At4g24700unknown proteinO.I.H.G.S.X.
0.4149.7Zm.14226.1.A1_atAt5g56750hypothetical protein LOC100273457-3e-2At3g20100CYP705A19O.I.H.G.S.X.
0.4149.7RPTR-Zm-ECOLOXB_x_atAt5g56750--O.I.H.G.S.X.
0.4048.5RPTR-Zm-J01347-3_atAt5g56750--O.I.H.G.S.X.
0.3945.6ZmAffx.334.1.A1_atAt5g56750--1e+1At3g23440EDA6 (EMBRYO SAC DEVELOPMENT ARREST 6)O.I.H.G.S.X.
0.3945.6ZmAffx.506.1.A1_atAt5g56750--3e-1At5g07225zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3945.6Zm.610.1.A1_atAt5g56750small basic membrane intrinsic protein1b-1e-1At4g16360AMP-activated protein kinaseO.I.H.G.S.X.
0.3945.6Zm.15431.1.S1_atAt5g56750hypothetical protein LOC100276766-1e-3At1g80780CCR4-NOT transcription complex protein, putativeO.I.H.G.S.X.
0.3945.6Zm.16892.3.S1_a_atAt5g56750calmodulin binding protein-5e-3At3g22190IQD5 (IQ-domain 5)O.I.H.G.S.X.
0.3945.6ZmAffx.426.1.A1_atAt5g56750--5e-2At5g43210endo/excinuclease amino terminal domain-containing proteinO.I.H.G.S.X.
0.3844.2Zm.2165.1.A1_atAt5g56750hypothetical protein LOC100278701-6e+0At5g25390SHN2 (shine2)O.I.H.G.S.X.
0.3844.2ZmAffx.519.1.A1_atAt5g56750hypothetical protein LOC100193190-3e+0At3g21352unknown proteinO.I.H.G.S.X.
0.3844.2Zm.34.2.A1_atAt5g56750nuclear cap-binding protein subunit 2-1e-13At5g44200CBP20 (CAP-BINDING PROTEIN 20)O.I.H.G.S.X.
0.3742.3ZmAffx.535.1.A1_atAt5g56750--2e-1At1g23270unknown proteinO.I.H.G.S.X.
0.3742.3RPTR-Zm-J01347-1_s_atAt5g56750--O.I.H.G.S.X.
0.3538.9Zm.1422.1.A1_atAt5g56750hypothetical protein LOC100279513-1e-59At2g45290transketolase, putativeO.I.H.G.S.X.
0.3437.2Zm.9142.1.A1_atAt5g56750--4e-1At3g23170unknown proteinO.I.H.G.S.X.
0.3131.6Zm.17208.1.A1_atAt5g56750Hypothetical protein LOC100193862-3e-2At5g38895zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2928.1Zm.1079.6.A1_atAt5g56750carbonic anhydrase-5e-1At1g56550UDP-xylosyltransferaseO.I.H.G.S.X.
0.2828.1ZmAffx.519.1.S1_atAt5g56750Hypothetical protein LOC100193190-3e+0At3g21352unknown proteinO.I.H.G.S.X.
0.1912.8ZmAffx.19.1.A1_atAt5g56750PWWP domain containing protein-1e+1At1g48745unknown proteinO.I.H.G.S.X.
0.1912.8Zm.9745.1.A1_atAt5g56750--2e+1At5g24570unknown proteinO.I.H.G.S.X.
0.1710.6Zm.3301.1.S1_atAt5g56750hypothetical protein LOC100216845-7e-25At5g26030FC1 (ferrochelatase 1)O.I.H.G.S.X.
0.169.4Zm.12152.1.S1_atAt5g56750hypothetical protein LOC100274505-1e-5At1g63120ATRBL2 (Arabidopsis thaliana Rhomboid-like 2)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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