Co-expression analysis

Gene ID GmaAffx.55680.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g56750: Ndr family protein (HF=2e-44)
Module size 6 genes
NF 0.61
%ile 90.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7187.80.96GmaAffx.55680.1.S1_atBE475029--2e-44At5g56750Ndr family proteinO.I.H.G.S.X.
0.6786.10.98GmaAffx.73080.1.S1_atBI427357--2e-1At4g21620glycine-rich proteinO.I.H.G.S.X.
0.6382.90.97GmaAffx.36562.2.S1_atBM731207--5e-15At1g14970unknown proteinO.I.H.G.S.X.
0.5071.70.98Gma.13878.1.S1_atCD408791--5e+0At5g01070zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.5071.70.98GmaAffx.51022.1.S1_atBM519886--9e-1At3g25920RPL15O.I.H.G.S.X.
0.4766.60.97GmaAffx.73253.1.S1_atBI786637--3e-1At5g56550OXS3 (OXIDATIVE STRESS 3)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
40.599.9GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
25.899.8GSM308559Mature Soybean (Glycine max) pollen grains Replicate 2GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
24.299.8GSM308560Mature Soybean (Glycine max) pollen grains Replicate 3GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO

Inter-species module comparison

A co-expression module including the wheat gene, TaAffx.112962.1.S1_at, orthologous to the query gene, GmaAffx.55680.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9899.9TaAffx.112962.1.S1_atAt5g56750--1e-21At5g56750Ndr family proteinO.I.H.G.S.X.
0.6282.3TaAffx.29673.1.S1_atAt5g56750--7e+0At5g14240-O.I.H.G.S.X.
0.6182.0Ta.12290.2.S1_atAt5g56750--4e-1At1g20696HMGB3 (HIGH MOBILITY GROUP B 3)O.I.H.G.S.X.
0.5979.8TaAffx.65688.1.S1_atAt5g56750--2e+1At3g02480ABA-responsive protein-relatedO.I.H.G.S.X.
0.5678.6TaAffx.15085.2.A1_x_atAt5g56750--1e+0At5g21960AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.5576.8TaAffx.107438.1.S1_atAt5g56750--1e-2At3g26110-O.I.H.G.S.X.
0.5576.8TaAffx.119995.1.S1_atAt5g56750--1e+0At1g31335unknown proteinO.I.H.G.S.X.
0.5273.7Ta.10132.1.A1_atAt5g56750--4e+0At3g15780unknown proteinO.I.H.G.S.X.
0.4969.7Ta.21581.1.S1_atAt5g56750--4e+0At2g36460fructose-bisphosphate aldolase, putativeO.I.H.G.S.X.
0.4767.9TaAffx.105660.1.S1_atAt5g56750--1e-3At3g01015-O.I.H.G.S.X.
0.4666.8TaAffx.85854.1.S1_atAt5g56750--2e-5At5g64500membrane protein-relatedO.I.H.G.S.X.
0.4666.8Ta.4895.3.S1_atAt5g56750--3e+0At2g28370-O.I.H.G.S.X.
0.4362.2Ta.2937.3.S1_atAt5g56750--1e+0At5g42330unknown proteinO.I.H.G.S.X.
0.4362.2TaAffx.78163.1.S1_atAt5g56750--9e-3At4g08868unknown proteinO.I.H.G.S.X.
0.4260.9Ta.26652.1.A1_atAt5g56750--1e-3At1g36050unknown proteinO.I.H.G.S.X.
0.4159.6Ta.16180.1.A1_atAt5g56750--1e+0At1g034102A6O.I.H.G.S.X.
0.4058.4TaAffx.50779.1.S1_atAt5g56750--3e+0At5g55460protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.4058.4TaAffx.65688.1.S1_x_atAt5g56750--2e+1At3g02480ABA-responsive protein-relatedO.I.H.G.S.X.
0.4058.4TaAffx.113024.3.S1_atAt5g56750--3e-1At5g26700germin-like protein, putativeO.I.H.G.S.X.
0.4058.4TaAffx.111311.1.S1_atAt5g56750--1e+0At1g61940AtTLP4 (TUBBY LIKE PROTEIN 4)O.I.H.G.S.X.
0.3956.1Ta.17796.1.S1_atAt5g56750--3e-10At2g41190amino acid transporter family proteinO.I.H.G.S.X.
0.3854.7TaAffx.7459.1.S1_atAt5g56750--2e+1At5g16567unknown proteinO.I.H.G.S.X.
0.3854.7TaAffx.82014.1.S1_atAt5g56750--1e+0At1g45063copper ion binding / electron carrierO.I.H.G.S.X.
0.3753.0Ta.6759.2.S1_x_atAt5g56750--2e+0At5g63310NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)O.I.H.G.S.X.
0.3651.9Ta.24929.2.S1_atAt5g56750--9e-1At5g16990NADP-dependent oxidoreductase, putativeO.I.H.G.S.X.
0.3651.9Ta.5158.1.S1_atAt5g56750--3e+0At4g35519unknown proteinO.I.H.G.S.X.
0.3549.8TaAffx.107008.1.S1_atAt5g56750--7e-2At2g24940AtMAPR2 (Arabidopsis thaliana membrane-associated progesterone binding protein 2)O.I.H.G.S.X.
0.3448.1TaAffx.82721.1.S1_atAt5g56750--3e+1At4g20780calcium-binding protein, putativeO.I.H.G.S.X.
0.3448.1TaAffx.61664.1.S1_atAt5g56750--2e-1At1g59171ATP binding / inositol pentakisphosphate 2-kinaseO.I.H.G.S.X.
0.3346.9TaAffx.78822.1.S1_atAt5g56750--1e+0At5g01075beta-galactosidaseO.I.H.G.S.X.
0.3346.9TaAffx.132656.2.S1_atAt5g56750--1e+0At1g76500SOB3 (SUPPRESSOR OF PHYB-4#3)O.I.H.G.S.X.
0.3244.4TaAffx.92350.1.S1_atAt5g56750--1e+0At5g47306unknown proteinO.I.H.G.S.X.
0.3142.7TaAffx.26777.1.S1_atAt5g56750--7e-2At3g45820unknown proteinO.I.H.G.S.X.
0.3040.9TaAffx.110652.1.S1_atAt5g56750--1e-2At2g23690unknown proteinO.I.H.G.S.X.
0.3040.9Ta.25608.2.S1_a_atAt5g56750--3e+0At1g77765unknown proteinO.I.H.G.S.X.
0.3040.9TaAffx.24121.1.S1_atAt5g56750--2e-1At1g11590pectin methylesterase, putativeO.I.H.G.S.X.
0.3040.9TaAffx.53587.2.S1_atAt5g56750--7e-2At4g34290SWIB complex BAF60b domain-containing proteinO.I.H.G.S.X.
0.2939.2TaAffx.6157.1.S1_atAt5g56750--4e+0At2g42930glycosyl hydrolase family protein 17O.I.H.G.S.X.
0.2939.2TaAffx.51911.1.S1_atAt5g56750--3e+0At1g78300GRF2 (GENERAL REGULATORY FACTOR 2)O.I.H.G.S.X.
0.2839.2TaAffx.78163.1.S1_x_atAt5g56750--9e-3At4g08868unknown proteinO.I.H.G.S.X.
0.2839.2Ta.6762.3.S1_atAt5g56750--1e+0At5g61490-O.I.H.G.S.X.
0.2839.2Ta.29473.2.S1_atAt5g56750--1e-3At5g58110ATPase activator/ chaperone bindingO.I.H.G.S.X.
0.2532.1TaAffx.80608.1.S1_atAt5g56750--1e+0At5g30495-O.I.H.G.S.X.
0.2024.0TaAffx.54497.1.S1_atAt5g56750--4e+0At4g09460ATMYB6O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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