Co-expression analysis

Gene ID GmaAffx.55680.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g56750: Ndr family protein (HF=2e-44)
Module size 6 genes
NF 0.61
%ile 90.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7187.80.96GmaAffx.55680.1.S1_atBE475029--2e-44At5g56750Ndr family proteinO.I.H.G.S.X.
0.6786.10.98GmaAffx.73080.1.S1_atBI427357--2e-1At4g21620glycine-rich proteinO.I.H.G.S.X.
0.6382.90.97GmaAffx.36562.2.S1_atBM731207--5e-15At1g14970unknown proteinO.I.H.G.S.X.
0.5071.70.98Gma.13878.1.S1_atCD408791--5e+0At5g01070zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.5071.70.98GmaAffx.51022.1.S1_atBM519886--9e-1At3g25920RPL15O.I.H.G.S.X.
0.4766.60.97GmaAffx.73253.1.S1_atBI786637--3e-1At5g56550OXS3 (OXIDATIVE STRESS 3)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
40.599.9GSM308556Mature Soybean (Glycine max) pollen grains replicate 1GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
25.899.8GSM308559Mature Soybean (Glycine max) pollen grains Replicate 2GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO
24.299.8GSM308560Mature Soybean (Glycine max) pollen grains Replicate 3GSE12286Genomic Expression Profiling of Mature Soybean (Glycine max) PollenLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.145592.1.S1_at, orthologous to the query gene, GmaAffx.55680.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6891.3PtpAffx.145592.1.S1_atAt5g56750hypothetical protein-9e-45At5g56750Ndr family proteinO.I.H.G.S.X.
0.5279.4PtpAffx.200584.1.S1_atAt5g56750hypothetical protein-2e-1At3g22600protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.4975.7PtpAffx.207018.1.S1_atAt5g56750hypothetical protein-1e-104At5g09550RAB GDP-dissociation inhibitorO.I.H.G.S.X.
0.4268.6PtpAffx.213364.1.S1_atAt5g56750hypothetical protein-9e-17At1g10385-O.I.H.G.S.X.
0.4067.0PtpAffx.202657.1.S1_atAt5g56750hypothetical protein-1e-10At3g24790ATP binding / kinase/ protein kinase/ protein serine/threonine kinaseO.I.H.G.S.X.
0.3964.6PtpAffx.95248.1.A1_atAt5g56750hypothetical protein-8e-1At2g36355unknown proteinO.I.H.G.S.X.
0.3964.6PtpAffx.24447.1.A1_atAt5g56750hypothetical protein-2e-2At3g23770glycosyl hydrolase family 17 proteinO.I.H.G.S.X.
0.3661.6PtpAffx.225688.1.S1_atAt5g56750hypothetical protein-5e-36At2g18470protein kinase family proteinO.I.H.G.S.X.
0.3661.6PtpAffx.206237.1.S1_atAt5g56750hypothetical protein-2e-33At2g37670WD-40 repeat family proteinO.I.H.G.S.X.
0.3458.3PtpAffx.218924.1.S1_atAt5g56750autoinhibited calcium ATPase-1e-28At2g41560ACA4 (AUTO-INHIBITED CA(2+)-ATPASE, ISOFORM 4)O.I.H.G.S.X.
0.3357.5PtpAffx.209719.1.S1_atAt5g56750hypothetical protein-2e-28At1g11250SYP125 (SYNTAXIN OF PLANTS 125)O.I.H.G.S.X.
0.2950.5PtpAffx.200244.1.S1_atAt5g56750hypothetical protein-3e-13At5g13150ATEXO70C1 (exocyst subunit EXO70 family protein C1)O.I.H.G.S.X.
0.2950.5PtpAffx.204952.1.S1_atAt5g56750hypothetical protein-6e-13At3g46750unknown proteinO.I.H.G.S.X.
0.2747.1PtpAffx.95960.1.A1_atAt5g56750hypothetical protein-3e-1At5g58782dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putativeO.I.H.G.S.X.
0.2645.2PtpAffx.202004.1.S1_atAt5g56750hypothetical protein-7e-15At3g49720unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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