Co-expression analysis

Gene ID	GmaAffx.55372.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At1g26520: - (HF=5e-6)
Module size	17 genes
NF	0.41
%ile	70.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.64	83.4	0.98	GmaAffx.55372.1.A1_at	BU547082	-	-	5e-6	At1g26520	-	O.I.	H.G.	S.X.	Please select
0.56	78.2	0.98	GmaAffx.90199.1.A1_s_at	CF806975	-	-	1e-44	At3g57870	SCE1 (SUMO CONJUGATION ENZYME 1)	O.I.	H.G.	S.X.	Please select
0.55	76.3	0.98	Gma.14954.1.S1_at	CD413469	-	-	5e-13	At3g05070	-	O.I.	H.G.	S.X.	Please select
0.54	74.8	0.98	Gma.3022.1.S1_a_at	BE823343	-	-	2e-13	At5g57490	VDAC4 (VOLTAGE DEPENDENT ANION CHANNEL 4)	O.I.	H.G.	S.X.	Please select
0.52	73.1	0.98	Gma.17782.1.S1_at	AW734221	-	-	9e-45	At1g27530	-	O.I.	H.G.	S.X.	Please select
0.48	67.7	0.98	Gma.7251.2.S1_a_at	AW396102	-	-	4e-10	At3g09810	isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putative	O.I.	H.G.	S.X.	Please select
0.48	67.7	0.98	Gma.7251.1.S1_a_at	BU548031	-	-	2e-62	At5g03290	isocitrate dehydrogenase, putative / NAD+ isocitrate dehydrogenase, putative	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.98	GmaAffx.88771.1.A1_s_at	CK605912	-	-	1e+0	At4g27840	-	O.I.	H.G.	S.X.	Please select
0.41	58.1	0.98	Gma.5649.2.S1_a_at	BI785611	protein disufide isomerase-like protein	-	4e-39	At2g47470	UNE5 (UNFERTILIZED EMBRYO SAC 5)	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.98	Gma.3199.1.S1_at	CD396242	-	-	7e-6	At1g08480	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.98	GmaAffx.93466.1.S1_s_at	CF809191	-	-	3e-10	At2g31305	INH3 (INHIBITOR-3)	O.I.	H.G.	S.X.	Please select
0.39	54.5	0.98	GmaAffx.91997.1.S1_s_at	CF807722	-	-	1e-62	At3g22950	ATARFC1 (ADP-ribosylation factor C1)	O.I.	H.G.	S.X.	Please select
0.34	47.2	0.98	Gma.15883.1.S1_s_at	AF255338.1	20S proteasome subunit	-	2e-86	At1g53850	PAE1	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.98	GmaAffx.59019.1.S1_at	AW133348	-	-	1e-136	Atmg00160	-	O.I.	H.G.	S.X.	Please select
0.30	40.4	0.98	Gma.4344.2.S1_a_at	BI700879	-	-	1e-79	At4g24820	26S proteasome regulatory subunit, putative (RPN7)	O.I.	H.G.	S.X.	Please select
0.27	35.7	0.98	GmaAffx.18860.1.S1_at	BE612054	-	-	3e-20	At4g12790	ATP-binding family protein	O.I.	H.G.	S.X.	Please select
0.24	30.9	0.98	Gma.5368.1.S1_at	BQ627877	-	-	2e-30	At5g05780	RPN8A (RP NON-ATPASE SUBUNIT 8A)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage