Co-expression analysis

Gene ID GmaAffx.55210.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g08650: PPCK1 (PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE) (HF=5e-1)
Module size 6 genes
NF 0.69
%ile 94.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6786.10.99GmaAffx.55210.1.S1_atBE804778--5e-1At1g08650PPCK1 (PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE)O.I.H.G.S.X.
0.7790.30.99GmaAffx.68425.1.S1_atBI425905--1e-35At3g57650LPAT2O.I.H.G.S.X.
0.6181.80.99GmaAffx.58610.1.S1_atBF066199--1e-2At3g49430SRp34a (Ser/Arg-rich protein 34a)O.I.H.G.S.X.
0.6181.80.99GmaAffx.56889.1.S1_s_atAW781023--3e-7At3g59380FTA (FARNESYLTRANSFERASE A)O.I.H.G.S.X.
0.5576.30.99GmaAffx.29121.1.S1_atBU762958--1e+0At4g17310unknown proteinO.I.H.G.S.X.
0.5576.30.99Gma.7528.2.S1_atBM891312--3e-49At4g16143IMPA-2 (IMPORTIN ALPHA ISOFORM 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1620701_at, orthologous to the query gene, GmaAffx.55210.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8995.51620701_atAt1g08650--4e+0At5g50930DNA bindingO.I.H.G.S.X.
0.3853.61621194_atAt1g08650--1e-6At5g04130DNA topoisomerase, ATP-hydrolyzing, putative / DNA topoisomerase II, putative / DNA gyrase, putativeO.I.H.G.S.X.
0.3548.51614146_atAt1g08650--4e+0At3g06690FAD binding / acyl-CoA oxidase/ electron carrier/ oxidoreductase/ oxidoreductase, acting on the CH-CH group of donorsO.I.H.G.S.X.
0.1920.91621014_atAt1g08650hypothetical protein LOC100258834-2e+0At3g06760-O.I.H.G.S.X.
0.1819.41608594_atAt1g08650hypothetical protein LOC100257466-1e-8At4g18900transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.1616.71615787_atAt1g08650similar to elongation factor 2-2e-168At1g56070LOS1O.I.H.G.S.X.
0.1515.61609810_atAt1g08650hypothetical protein LOC100245397-3e-32At4g08900arginaseO.I.H.G.S.X.
0.1515.61612561_s_atAt1g08650hypothetical protein LOC100267451-3e+0At5g40620unknown proteinO.I.H.G.S.X.
0.1515.61620747_atAt1g08650hypothetical protein LOC100245397-3e-29At4g08900arginaseO.I.H.G.S.X.
0.1313.31615474_atAt1g08650--8e-49At4g39520GTP-binding protein, putativeO.I.H.G.S.X.
0.1313.31606982_atAt1g08650--2e-5At3g20320TGD2 (TRIGALACTOSYLDIACYLGLYCEROL2)O.I.H.G.S.X.
0.1212.11610107_atAt1g08650hypothetical protein LOC100257273-1e-7At4g13780methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putativeO.I.H.G.S.X.
0.1212.11617690_atAt1g08650hypothetical protein LOC100241678-4e+0At5g01810CIPK15 (CBL-INTERACTING PROTEIN KINASE 15)O.I.H.G.S.X.
0.1212.11609567_atAt1g08650hypothetical protein LOC100241045-1e-3At5g642502-nitropropane dioxygenase family / NPD familyO.I.H.G.S.X.
0.1212.11608779_atAt1g08650hypothetical protein LOC100243991-3e-23At5g11960unknown proteinO.I.H.G.S.X.
0.1111.31614872_s_atAt1g08650hypothetical protein LOC100250566-3e-4At1g19730ATTRX4O.I.H.G.S.X.
0.1111.31610868_s_atAt1g08650hypothetical protein LOC100244419-2e-8At1g79550PGK (PHOSPHOGLYCERATE KINASE)O.I.H.G.S.X.
0.1010.31620546_atAt1g08650similar to T5E21.11-5e-46At1g14610TWN2 (TWIN 2)O.I.H.G.S.X.
0.099.41617689_atAt1g08650--1e+0At3g22660rRNA processing protein-relatedO.I.H.G.S.X.
0.099.41609920_atAt1g08650hypothetical protein LOC100264144-4e-30At5g19820emb2734 (embryo defective 2734)O.I.H.G.S.X.
0.077.81622422_atAt1g08650hypothetical protein LOC100251499-2e-21At1g72990BGAL17 (beta-galactosidase 17)O.I.H.G.S.X.
0.066.81622290_atAt1g08650hypothetical protein LOC100248560-3e-7At1g767305-formyltetrahydrofolate cyclo-ligase family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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