Co-expression analysis

Gene ID	GmaAffx.54917.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g43440: 2-oxoglutarate-dependent dioxygenase, putative (HF=5e+0)
Module size	6 genes
NF	0.06
%ile	20.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.1	0.97	GmaAffx.54917.1.S1_at	AW666047	-	-	5e+0	At5g43440	2-oxoglutarate-dependent dioxygenase, putative	O.I.	H.G.	S.X.	Please select
0.13	16.3	0.98	Gma.6903.1.A1_at	BE657510	-	-	1e+0	At4g33130	-	O.I.	H.G.	S.X.	Please select
0.07	10.2	0.97	Gma.6780.2.S1_at	BQ786058	-	-	1e-45	At2g25910	3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein	O.I.	H.G.	S.X.	Please select
0.07	10.2	0.97	GmaAffx.29585.1.A1_at	CD397532	-	-	3e+0	At2g31730	ethylene-responsive protein, putative	O.I.	H.G.	S.X.	Please select
0.04	7.0	0.97	GmaAffx.77010.1.S1_at	BE821775	-	-	2e-40	At4g38240	CGL1 (COMPLEX GLYCAN LESS 1)	O.I.	H.G.	S.X.	Please select
0.02	4.5	0.98	GmaAffx.46095.1.S1_at	BU544901	-	-	8e-8	At5g09320	VPS9B	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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