Co-expression analysis

Gene ID	GmaAffx.54770.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g59820: RHL41 (RESPONSIVE TO HIGH LIGHT 41) (HF=1e-10)
Module size	17 genes
NF	0.41
%ile	71.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.82	91.9	0.92	GmaAffx.54770.1.S1_at	BI321317	-	-	1e-10	At5g59820	RHL41 (RESPONSIVE TO HIGH LIGHT 41)	O.I.	H.G.	S.X.	Please select
0.49	68.3	0.96	Gma.2821.2.S1_a_at	BI469945	PR-5 protein	-	2e-2	At4g11650	ATOSM34 (osmotin 34)	O.I.	H.G.	S.X.	Please select
0.49	68.3	0.95	Gma.1082.1.S1_at	AF243374.1	glutathione S-transferase GST 19	-	5e-1	At2g29420	ATGSTU7 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 7)	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.94	GmaAffx.69792.1.S1_s_at	BU550596	-	-	3e-8	At5g64750	ABR1 (ABA REPRESSOR1)	O.I.	H.G.	S.X.	Please select
0.43	60.6	0.96	Gma.2821.2.S1_at	BI469945	PR-5 protein	-	2e-2	At4g11650	ATOSM34 (osmotin 34)	O.I.	H.G.	S.X.	Please select
0.41	58.1	0.94	GmaAffx.42847.1.S1_s_at	BU578388	-	-	5e-12	At2g14580	ATPRB1	O.I.	H.G.	S.X.	Please select
0.40	57.1	0.96	Gma.7728.1.S1_at	BI942310	-	-	8e-25	At3g21500	1-deoxy-D-xylulose-5-phosphate synthase	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.96	GmaAffx.18924.1.S1_at	BU546215	-	-	1e-5	At2g18950	HPT1 (HOMOGENTISATE PHYTYLTRANSFERASE 1)	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.94	GmaAffx.15262.1.S1_at	BI469858	-	-	2e+0	At5g16480	tyrosine specific protein phosphatase family protein	O.I.	H.G.	S.X.	Please select
0.37	51.7	0.94	GmaAffx.28803.1.S1_at	BQ742488	-	-	9e-7	At5g62150	peptidoglycan-binding LysM domain-containing protein	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.94	Gma.11277.1.S1_at	CA802310	-	-	1e-1	At1g16905	sugar binding	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.94	GmaAffx.87547.3.S1_at	BG507836	-	-	3e-3	At1g61810	BGLU45 (BETA-GLUCOSIDASE 45)	O.I.	H.G.	S.X.	Please select
0.34	47.2	0.94	GmaAffx.78456.1.S1_at	BQ081108	-	-	4e-6	At2g46750	FAD-binding domain-containing protein	O.I.	H.G.	S.X.	Please select
0.33	46.1	0.94	GmaAffx.91156.1.S1_x_at	CF806881	-	-	3e-1	At5g36970	NHL25 (NDR1/HIN1-LIKE 25)	O.I.	H.G.	S.X.	Please select
0.32	43.7	0.95	Gma.11345.1.S1_at	BE024036	MYB transcription factor MYB92	-	1e-14	At3g62610	ATMYB11 (MYB DOMAIN PROTEIN 11)	O.I.	H.G.	S.X.	Please select
0.32	43.7	0.96	GmaAffx.74889.1.S1_at	CA851547	-	-	9e-12	At2g41690	AT-HSFB3	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.94	Gma.11277.1.S1_x_at	CA802310	-	-	1e-1	At1g16905	sugar binding	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.2	97.4	GSM294047	96_3095.2F.R9F1L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.9	97.1	GSM293015	20_1089.1N.R055L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM292405	9_C101.1F.R9F2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.5	96.6	GSM293080	7_C033.1N.R9N3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.4	96.4	GSM293553	67_3017.2A.R9A3L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM294266	22_2417.2I.R236L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM292359	28_C099.1F.V7F2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM294151	16_3139.2H.R9H3L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.3	96.2	GSM292845	24_1445.1L.R272L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM294272	26_2427.2I.R297L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM294007	5_3095.2F.R9F1U, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.2	96.0	GSM292791	51_1403.1K.R250L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM294303	54_3153.2I.R9I2L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM294169	32_3137.2H.R9H2L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM292793	53_C197.1K.R9K3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM293226	15_C065.1P.R9P2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM292730	75_C165.1J.R9J1L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.1	95.8	GSM293408	90_C079.1Q.R9Q2L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM293294	77_C067.1P.R9P3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM293965	21_2245.2F.R272L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM293248	35_1155.1P.R097L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM293938	84_3083.2E.R9E2L, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.0	95.6	GSM244909	3_VP9.I3L2.CEL, Experimental replicate 2	GSE9687	Expression patterns in time and space during P.sojae infection of soybean cultivars differing in quantitative resistance

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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