Co-expression analysis

Gene ID	GmaAffx.53612.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g17165: unknown protein (HF=3e+0)
Module size	6 genes
NF	0.05
%ile	17.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.1	0.83	GmaAffx.53612.1.A1_at	BE583680	-	-	3e+0	At5g17165	unknown protein	O.I.	H.G.	S.X.	Please select
0.38	53.3	0.84	PsAffx.C112000039_at	PsAffx.C112000039	-	-	2e-1	At4g34530	CIB1 (CRYPTOCHROME-INTERACTING BASIC-HELIX-LOOP-HELIX 1)	O.I.	H.G.	S.X.	Please select
0.09	12.0	0.87	PsAffx.CL880Contig1_at	PsAffx.CL880Contig1	-	-	1e-1	At2g43090	aconitase C-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.07	10.2	0.89	GmaAffx.93041.1.S1_at	CF808766	-	-	9e-8	At1g73620	thaumatin-like protein, putative / pathogenesis-related protein, putative	O.I.	H.G.	S.X.	Please select
0.03	5.8	0.89	GmaAffx.90753.1.S1_at	CF806478	-	-	1e+0	At5g49300	zinc finger (GATA type) family protein	O.I.	H.G.	S.X.	Please select
0.01	3.4	0.89	PsAffx.CL2577Contig1_s_at	PsAffx.CL2577Contig1	-	-	9e-1	At3g42148	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
20.2	99.7	GSM308556	Mature Soybean (Glycine max) pollen grains replicate 1	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
12.7	99.5	GSM308560	Mature Soybean (Glycine max) pollen grains Replicate 3	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
11.8	99.4	GSM308559	Mature Soybean (Glycine max) pollen grains Replicate 2	GSE12286	Genomic Expression Profiling of Mature Soybean (Glycine max) Pollen
8.0	99.0	GSM292923	95_1465.1L.R283L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
4.1	97.3	GSM292448	49_C110.1G.V7G1P, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.8	97.0	GSM292838	18_C211.1L.SLL3L, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.7	96.8	GSM293082	81_C019.1N.R9N1U, Experimental replicate 1	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae
3.6	96.7	GSM294268	23_2428.2I.R297P, Experimental replicate 2	GSE11611	Combined gene expression and QTL analysis of soybean quantitative resistance to Phytophthora sojae

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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