Co-expression analysis

Gene ID	GmaAffx.52373.2.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g18940: clast3-related (HF=6e-2)
Module size	33 genes
NF	0.46
%ile	77.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.86	93.0	0.98	GmaAffx.52373.2.S1_at	BM308168	-	-	6e-2	At3g18940	clast3-related	O.I.	H.G.	S.X.	Please select
0.65	83.8	0.99	GmaAffx.88721.1.S1_s_at	CK606003	-	-	5e-12	At1g75990	26S proteasome regulatory subunit S3, putative (RPN3)	O.I.	H.G.	S.X.	Please select
0.61	81.8	0.98	Gma.4707.3.S1_s_at	BG725902	-	-	4e-68	At2g47170	ARF1A1C	O.I.	H.G.	S.X.	Please select
0.54	74.8	0.98	Gma.14954.1.S1_at	CD413469	-	-	5e-13	At3g05070	-	O.I.	H.G.	S.X.	Please select
0.54	74.8	0.99	Gma.17742.1.S1_at	BF599092	-	-	1e-12	At4g29330	DER1 (DERLIN-1)	O.I.	H.G.	S.X.	Please select
0.53	74.2	0.98	Gma.4344.2.S1_a_at	BI700879	-	-	1e-79	At4g24820	26S proteasome regulatory subunit, putative (RPN7)	O.I.	H.G.	S.X.	Please select
0.51	72.3	0.99	GmaAffx.90062.1.S1_s_at	CF805787	-	-	1e-108	At1g53750	RPT1A (REGULATORY PARTICLE TRIPLE-A 1A)	O.I.	H.G.	S.X.	Please select
0.50	71.7	0.99	GmaAffx.59019.1.S1_at	AW133348	-	-	1e-136	Atmg00160	-	O.I.	H.G.	S.X.	Please select
0.49	68.3	0.99	GmaAffx.92455.1.S1_s_at	CF808180	-	-	5e-34	At5g42790	PAF1	O.I.	H.G.	S.X.	Please select
0.48	67.7	0.98	Gma.17047.1.S1_x_at	AW350843	-	-	6e+0	At4g03290	calcium-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.48	67.7	0.98	Gma.8031.3.S1_a_at	AW704196	-	-	8e-8	At4g12590	unknown protein	O.I.	H.G.	S.X.	Please select
0.47	66.6	0.98	GmaAffx.91720.1.S1_s_at	CF807445	-	-	6e-12	At2g21870	unknown protein	O.I.	H.G.	S.X.	Please select
0.46	65.5	0.98	Gma.16563.4.S1_a_at	BF426017	-	-	1e-18	At5g45620	26S proteasome regulatory subunit, putative (RPN9)	O.I.	H.G.	S.X.	Please select
0.45	63.9	0.98	GmaAffx.70076.1.S1_at	BU964854	-	-	1e-6	At1g32260	unknown protein	O.I.	H.G.	S.X.	Please select
0.45	63.9	0.98	GmaAffx.14686.2.S1_s_at	AW756251	-	-	5e-24	At1g65650	UCH2	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.98	Gma.17047.1.S1_s_at	AW350843	-	-	6e+0	At4g03290	calcium-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.98	GmaAffx.92910.1.S1_s_at	CF806558	-	-	2e-45	At3g52300	ATPQ (ATP SYNTHASE D CHAIN, MITOCHONDRIAL)	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.99	Gma.13142.2.S1_a_at	BF069870	-	-	2e-13	At5g15220	ribosomal protein L27 family protein	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.99	Gma.17539.2.S1_s_at	BM886770	proteasome IOTA subunit	-	1e-36	At5g35590	PAA1 (PROTEASOME ALPHA SUBUNIT A 1)	O.I.	H.G.	S.X.	Please select
0.44	63.3	0.98	GmaAffx.65487.1.S1_at	AW101035	-	-	4e-28	At3g11270	MEE34 (maternal effect embryo arrest 34)	O.I.	H.G.	S.X.	Please select
0.43	60.6	0.98	GmaAffx.88771.1.A1_s_at	CK605912	-	-	1e+0	At4g27840	-	O.I.	H.G.	S.X.	Please select
0.43	60.6	0.98	Gma.6353.1.S1_at	AI960028	-	-	1e-4	At1g67250	proteasome maturation factor UMP1 family protein	O.I.	H.G.	S.X.	Please select
0.43	60.6	0.99	GmaAffx.91569.1.S1_s_at	CF807294	-	-	7e-52	At1g21720	PBC1 (PROTEASOME BETA SUBUNIT C1)	O.I.	H.G.	S.X.	Please select
0.42	59.3	0.99	Gma.11202.1.S1_s_at	AW309575	-	-	3e-20	At1g27310	NTF2A (NUCLEAR TRANSPORT FACTOR 2A)	O.I.	H.G.	S.X.	Please select
0.41	58.1	0.98	Gma.16563.4.S1_x_at	BF426017	-	-	1e-18	At5g45620	26S proteasome regulatory subunit, putative (RPN9)	O.I.	H.G.	S.X.	Please select
0.41	58.1	0.99	Gma.5810.2.S1_a_at	AI965339	-	-	2e-79	At3g26340	20S proteasome beta subunit E, putative	O.I.	H.G.	S.X.	Please select
0.41	58.1	0.98	Gma.8031.1.S1_at	BE823105	-	-	4e-76	At4g12590	unknown protein	O.I.	H.G.	S.X.	Please select
0.39	54.5	0.98	GmaAffx.22627.1.S1_at	BG352722	-	-	4e-2	At1g18520	TET11 (TETRASPANIN11)	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.98	Gma.5368.1.S1_at	BQ627877	-	-	2e-30	At5g05780	RPN8A (RP NON-ATPASE SUBUNIT 8A)	O.I.	H.G.	S.X.	Please select
0.36	50.8	0.98	Gma.10826.5.S1_x_at	BM732455	-	-	2e-108	At5g55190	RAN3 (RAN GTPASE 3)	O.I.	H.G.	S.X.	Please select
0.34	47.2	0.98	Gma.739.1.S1_at	BG882670	-	-	6e-15	At5g27490	integral membrane Yip1 family protein	O.I.	H.G.	S.X.	Please select
0.34	47.2	0.98	GmaAffx.87490.1.S1_at	BM891831	-	-	1e+0	At3g23635	RTFL13 (ROTUNDIFOLIA LIKE 13)	O.I.	H.G.	S.X.	Please select
0.31	42.2	0.98	GmaAffx.22627.1.S1_x_at	BG352722	-	-	4e-2	At1g18520	TET11 (TETRASPANIN11)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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