Co-expression analysis

Gene ID GmaAffx.51829.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g14810: unknown protein (HF=5e-1)
Module size 18 genes
NF 0.44
%ile 74.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6583.80.96GmaAffx.51829.1.S1_atBU763894--5e-1At4g14810unknown proteinO.I.H.G.S.X.
0.6483.40.97GmaAffx.2349.1.S1_atCD406663--5e-2At5g46780VQ motif-containing proteinO.I.H.G.S.X.
0.5576.30.97Gma.10829.1.S1_a_atCD404695--1e-4At2g28360-O.I.H.G.S.X.
0.5374.20.97GmaAffx.30561.1.S1_atAW781058--2e-1At1g63260TET10 (TETRASPANIN10)O.I.H.G.S.X.
0.4968.30.97GmaAffx.18569.1.S1_atCA802540--7e+0At4g05270ubiquitin family proteinO.I.H.G.S.X.
0.4766.60.98Gma.4288.1.S1_atBE659478--3e+0At1g34790TT1 (transparent testa 1)O.I.H.G.S.X.
0.4766.60.98GmaAffx.12491.1.S1_atBE347527--1e+0At5g23380unknown proteinO.I.H.G.S.X.
0.4665.50.97Gma.4412.1.S1_s_atL28002.1TATA-box binding protein-4e-51At1g55520TBP2 (TATA BINDING PROTEIN 2)O.I.H.G.S.X.
0.4360.60.97Gma.15891.2.S1_s_atBI316425--1e-3At1g22800methyltransferaseO.I.H.G.S.X.
0.4259.30.98Gma.14379.1.A1_atCD412090--7e-1At3g11770nucleic acid bindingO.I.H.G.S.X.
0.4259.30.97GmaAffx.18743.1.S1_atBI970522--4e-1At5g26770unknown proteinO.I.H.G.S.X.
0.4158.10.97Gma.12624.1.S1_atCD400674--5e-1At1g11650RNA-binding protein 45 (RBP45), putativeO.I.H.G.S.X.
0.3650.80.97GmaAffx.22368.1.S1_atBE823429--1e+0At3g50850unknown proteinO.I.H.G.S.X.
0.3650.80.97Gma.12475.1.S1_atCD392558--2e+0At5g25640-O.I.H.G.S.X.
0.3447.20.97Gma.8173.1.A1_atBF598954--3e-18At1g69670CUL3B (CULLIN 3B)O.I.H.G.S.X.
0.3447.20.97Gma.2338.3.S1_atBI426604--3e-48At5g10980histone H3O.I.H.G.S.X.
0.3142.20.97GmaAffx.93192.1.S1_s_atCF808917--5e+0At5g63087-O.I.H.G.S.X.
0.2430.90.97GmaAffx.2122.1.S1_atBI498615--5e-1At3g21215RNA-binding protein, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.298.6GSM201105Laser capture microdissected (LCM) axis shoot meristem at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
6.298.6GSM147935Laser capture microdissected (LCM) embryo proper at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.598.3GSM201104Laser capture microdissected (LCM) axis shoot meristem at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
5.298.1GSM182042Laser capture microdissected (LCM) hilum at the heart stage, biological replicate 2GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
5.198.1GSM147950Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 3GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
5.098.0GSM201123Laser capture microdissected (LCM) seed coat hilum at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.998.0GSM182041Laser capture microdissected (LCM) hilum at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.797.8GSM191087Soybean_Cotyledon_II1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.697.7GSM201108Laser capture microdissected (LCM) cotyledon abaxial epidermis at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.697.7GSM147949Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
4.697.7GSM201122Laser capture microdissected (LCM) seed coat hilum at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.697.7GSM201107Laser capture microdissected (LCM) axis vascular bundle at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.697.7GSM191085Soybean_Cotyledon_HI1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.597.7GSM201099Laser capture microdissected (LCM) axis plumule at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.597.7GSM201098Laser capture microdissected (LCM) axis plumule at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.497.6GSM191088Soybean_Cotyledon_II2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.497.6GSM201116Laser capture microdissected (LCM) cotyledon vascular bundle at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.497.6GSM147948Laser capture microdissected (LCM) hilum at the globular stage, biological replicate 1GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
4.497.6GSM182037Laser capture microdissected (LCM) endothelium at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.497.6GSM147937Laser capture microdissected (LCM) suspensor at the globular stage, biological replicate 2GSE6414Expression data from soybean seed compartments with embryos at the globular stageLink to GEO
4.397.5GSM201125Laser capture microdissected (LCM) seed coat palisade at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.397.5GSM191086Soybean_Cotyledon_HI2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.397.5GSM201109Laser capture microdissected (LCM) cotyledon abaxial epidermis at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.297.4GSM201119Laser capture microdissected (LCM) seed coat aleurone at the early maturation stage, biological replicate 2GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.297.4GSM191075Soybean_Cotyledon_EP1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.297.4GSM201102Laser capture microdissected (LCM) axis root meristem at the early maturation stage, biological replicate 1GSE8112Expression data from soybean seed compartments with embryos at the early maturation stageLink to GEO
4.297.4GSM182043Laser capture microdissected (LCM) inner integument at the heart stage, biological replicate 1GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.297.4GSM191083Soybean_Cotyledon_EPD1GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO
4.297.4GSM182031Laser capture microdissected (LCM) embryo proper at the heart stage, biological replicate 3GSE7511Expression data from soybean seed compartments with embryos at the heart stageLink to GEO
4.297.4GSM191076Soybean_Cotyledon_EP2GSE7881Expression data from soybean seed compartments with embryos at the cotyledon stageLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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